RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 EFCAB3Q8N7B9 438 aa13.76□□□□□ -0.21
SMARCAL1-210ENST00000445153 RBMXL3Q8N7X1 1067 aaKnown RBP13.76□□□□□ -0.21
SMARCAL1-210ENST00000445153 CPT1BQ92523 772 aa13.76□□□□□ -0.21
SMARCAL1-210ENST00000445153 ALG3Q92685 438 aa13.76□□□□□ -0.21
SMARCAL1-210ENST00000445153 CLIP3Q96DZ5 547 aa13.76□□□□□ -0.21
SMARCAL1-210ENST00000445153 FERD3LQ96RJ6 166 aa13.76□□□□□ -0.21
SMARCAL1-210ENST00000445153 OR52A5Q9H2C5 316 aa13.76□□□□□ -0.21
SMARCAL1-210ENST00000445153 SNX7Q9UNH6 387 aa13.76□□□□□ -0.21
SMARCAL1-210ENST00000445153 COLEC10Q9Y6Z7 277 aa13.76□□□□□ -0.21
SMARCAL1-210ENST00000445153 CCDC66A2RUB6 948 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 C5orf60A6NFR6 353 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 A6NL46 340 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 C2orf81A6NN90 581 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 TMEM150CB9EJG8 249 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 HCRTR1O43613 425 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 CTSBP07858 339 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 PSMB4P28070 264 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 TNNT3P45378 269 aaPredicted RBP13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 PREPP48147 710 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 GEMP55040 296 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 MRPL49Q13405 166 aaKnown RBP13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 SPARCL1Q14515 664 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 KRT33BQ14525 404 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 EIF2S3LQ2VIR3 472 aaKnown RBP13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 ANKRD20A2Q5SQ80 823 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 ANKRD20A1Q5TYW2 823 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 ANKRD20A3Q5VUR7 823 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 ZNF385CQ66K41 422 aaPredicted RBP13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 CDHR3Q6ZTQ4 885 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 CCDC50Q8IVM0 306 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 SYTL1Q8IYJ3 562 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 NXPE1Q8N323 547 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 ACVR1CQ8NER5 493 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 OR52E1Q8NGJ3 308 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 ACTL9Q8TC94 416 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 HM13Q8TCT9 377 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 LCN9Q8WX39 176 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 C19orf60Q96EN9 201 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 TRAPPC9Q96Q05 1148 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 PITPNM3Q9BZ71 974 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 SRMSQ9H3Y6 488 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 XKR8Q9H6D3 395 aa13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 ACTR5Q9H9F9 607 aaPredicted RBP13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 SPTBN1Q01082 2364 aaKnown RBP13.75□□□□□ -0.21
SMARCAL1-210ENST00000445153 GSAPA4D1B5 854 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 KLHL33A6NCF5 533 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 H7C0C1 242 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 APOC4-APOC2K7ER74 178 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 MASP2O00187 686 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 KRT86O43790 486 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 ANXA9O76027 345 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 APOC2P02655 101 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 TPBGLP0DKB5 382 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 ATP1B2P14415 290 aaPredicted RBP13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 NDUFS1P28331 727 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 CTNNA1P35221 906 aaKnown RBP13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 ATP5OP48047 213 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 VAV2P52735 878 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 ZNF140P52738 457 aaPredicted RBP13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 FOXL2P58012 376 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 OTUD4Q01804 1114 aaKnown RBP13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 PRKAA1Q13131 559 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 PRKG2Q13237 762 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 RAPSNQ13702 412 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 ATP1A4Q13733 1029 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 SLC6A19Q695T7 634 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 TMEM139Q8IV31 216 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 ADGRF3Q8IZF5 1079 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 LRRC57Q8N9N7 239 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 GLIS1Q8NBF1 620 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 ACRBPQ8NEB7 543 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 SSC4DQ8WTU2 575 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 DCUN1D1Q96GG9 259 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 CCM2Q9BSQ5 444 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 TFB2MQ9H5Q4 396 aaKnown RBP13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 COG4Q9H9E3 785 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 FAM60AQ9NP50 221 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 CRLS1Q9UJA2 301 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 ZNF451Q9Y4E5 1061 aa13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 EPN1Q9Y6I3 576 aaPredicted RBP13.74□□□□□ -0.21
SMARCAL1-210ENST00000445153 RP1L1Q8IWN7 2480 aaPredicted RBP13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 IGLV3-16A0A075B6K0 115 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 C17orf113A0A1B0GUU1 675 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 GRID2IPA4D2P6 1211 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 H3BMH7 237 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 PJA2O43164 708 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 ZNF749O43361 778 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 LDB2O43679 373 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 KLF7O75840 302 aaPredicted RBP13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 MSL3P1P0C860 447 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 CBSLP0DN79 551 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 CYP2A7P20853 494 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 CBSP35520 551 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 GABRA4P48169 554 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 NCF4Q15080 339 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 ZIC1Q15915 447 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 SNX20Q7Z614 316 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 TRIM73Q86UV7 250 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 CCDC170Q8IYT3 715 aa13.73□□□□□ -0.21
SMARCAL1-210ENST00000445153 CLDN19Q8N6F1 224 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms