RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 DTD1Q8TEA8 209 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 CD101Q93033 1021 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 FBXO32Q969P5 355 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 MARC2Q969Z3 335 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 PHF21AQ96BD5 680 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 PDXPQ96GD0 296 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 B3GALT6Q96L58 329 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 C9orf72Q96LT7 481 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 CSPG4P5Q96PW8 444 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 ZBTB18Q99592 522 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 SYT15Q9BQS2 421 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 NEURL2Q9BR09 285 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 PAPOLGQ9BWT3 736 aaKnown RBP4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 APOL6Q9BWW8 343 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 SPATA16Q9BXB7 569 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 C1QTNF7Q9BXJ2 289 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 IDI2Q9BXS1 227 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 ITPAQ9BY32 194 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 RAB33BQ9H082 229 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 MINDY3Q9H8M7 445 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 SEPSECSQ9HD40 501 aaKnown RBP4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 DDX43Q9NXZ2 648 aaKnown RBP4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 MAN1B1Q9UKM7 699 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 AGO1Q9UL18 857 aaKnown RBP4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 PYCARDQ9ULZ3 195 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 PCDHGA7Q9Y5G6 932 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 PCDHGA6Q9Y5G7 932 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 ERVK-7P63135 1459 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 UTYO14607 1347 aa4.67□□□□□ -1.66
HMGB3P9-201ENST00000441799 RTL1A6NKG5 1358 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 PNPLA6Q8IY17 1366 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 NOS1P29475 1434 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 TRAV20A0A0B4J274 112 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 A0A1W2PQU0 124 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 UBE2Q2LH0YL09 131 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 hCG_2039718K7EN88 272 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 CLDN4O14493 209 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 SOCS6O14544 535 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 SLC16A6O15403 523 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 TOX3O15405 576 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 PRODHO43272 600 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 LRRTM2O43300 516 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ADAM20O43506 726 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 CALUO43852 315 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 BCAS1O75363 584 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 H2AFYO75367 372 aaKnown RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 PRPF6O94906 941 aaKnown RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 SERPINA5P05154 406 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ANXA5P08758 320 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 CD3GP09693 182 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 FAM228BP0C875 321 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ENO3P13929 434 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 TCF4P15884 667 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ACADSP16219 412 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 PRPS1L1P21108 318 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ATP6V1C1P21283 382 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 NT5EP21589 574 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 HOXC8P31273 242 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 YWHABP31946 246 aaKnown RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 CRATP43155 626 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 GPR4P46093 362 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 CSNK1DP48730 415 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 BCAP31P51572 246 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ARSEP51690 589 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 NEK4P51957 841 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 CLDN8P56748 225 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ACTR3P61158 418 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 AP1S1P61966 158 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 RPS8P62241 208 aaKnown RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 SKP1P63208 163 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 TNFRSF17Q02223 184 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 UBE3AQ05086 875 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 RASGEF1BQ0VAM2 473 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 CDH17Q12864 832 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 STX3Q13277 289 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 MAB21L1Q13394 359 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 SNTA1Q13424 505 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 TBR1Q16650 682 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 MEP1BQ16820 701 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 PPP1R3AQ16821 1122 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 TMEM44Q2T9K0 475 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 CNPY1Q3B7I2 92 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 HSDL1Q3SXM5 330 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 BMP2KLQ5H9B9 411 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ZNF311Q5JNZ3 666 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 BEND3Q5T5X7 828 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 SLC9C2Q5TAH2 1124 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 STRIP1Q5VSL9 837 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 LCN1P1Q5VSP4 162 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 LIPNQ5VXI9 398 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 RRAGBQ5VZM2 374 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 KRT79Q5XKE5 535 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 PYHIN1Q6K0P9 492 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 MFSD5Q6N075 450 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 C5orf46Q6UWT4 87 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 IL20RBQ6UXL0 311 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 RSPO2Q6UXX9 243 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 SCARA5Q6ZMJ2 495 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 LINC00696Q6ZRV3 163 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 USP53Q70EK8 1073 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms