RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 ZNF366Q8N895 744 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 HJURPQ8NCD3 748 aaPredicted RBP4.75□□□□□ -1.65
PTPN4-206ENST00000441089 CCNYQ8ND76 341 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 OR14C36Q8NHC7 312 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 GRK7Q8WTQ7 553 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 TFB1MQ8WVM0 346 aaKnown RBP4.75□□□□□ -1.65
PTPN4-206ENST00000441089 SORCS1Q8WY21 1168 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 CPT1BQ92523 772 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 SLC45A3Q96JT2 553 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 NSMCE3Q96MG7 304 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 TSGA13Q96PP4 275 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 GFM1Q96RP9 751 aaKnown RBP4.75□□□□□ -1.65
PTPN4-206ENST00000441089 IL12RB2Q99665 862 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 CMKLR1Q99788 373 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 DDX50Q9BQ39 737 aaKnown RBP4.75□□□□□ -1.65
PTPN4-206ENST00000441089 EFHD1Q9BUP0 239 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 PCDH9Q9HC56 1237 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 ZDHHC18Q9NUE0 388 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 ASIC3Q9UHC3 531 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 FAM153AQ9UHL3 310 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 IPO11Q9UI26 975 aaKnown RBP4.75□□□□□ -1.65
PTPN4-206ENST00000441089 INTS6Q9UL03 887 aaKnown RBP4.75□□□□□ -1.65
PTPN4-206ENST00000441089 LOXL2Q9Y4K0 774 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 TGP01266 2768 aa4.75□□□□□ -1.65
PTPN4-206ENST00000441089 ILVBLA1L0T0 632 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 ARHGAP42A6NI28 874 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 TCP11X1B4DZS4 312 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 MID1O15344 667 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 KDELR3O43731 214 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 PRAMEF11O60813 436 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 GCATO75600 419 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 NEBLO76041 1014 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 GAS8O95995 478 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 JCHAINP01591 159 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 PLA2G1BP04054 148 aaKnown RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 HLA-DQB2P05538 268 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 DLDP09622 509 aaKnown RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 LIFP15018 202 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 CAPN3P20807 821 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 CCNCP24863 283 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 ITGA3P26006 1051 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 PSMB4P28070 264 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 HLA-FP30511 346 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 STIP1P31948 543 aaKnown RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 SLC8A1P32418 973 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 RGRP47804 291 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 ITGA8P53708 1063 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 MAPK10P53779 464 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 ADPRHP54922 357 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 DRG2P55039 364 aaKnown RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 YBEYP58557 167 aaPredicted RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 ST8SIA6P61647 398 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 TUBB4BP68371 445 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 IFI35P80217 286 aaPredicted RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 IL10RBQ08334 325 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 NIPAL4Q0D2K0 466 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 SLC10A7Q0GE19 358 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 CDC20Q12834 499 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 GPS1Q13098 491 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 MRPL49Q13405 166 aaKnown RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 OLIG2Q13516 323 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 KCNJ11Q14654 390 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 POLD3Q15054 466 aaPredicted RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 PPP1R7Q15435 360 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 CYTH1Q15438 398 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 PARP15Q460N3 678 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 TEX44Q53QW1 395 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 ZRANB3Q5FWF4 1079 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 IZUMO3Q5VZ72 239 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 TMEM215Q68D42 235 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 HIBCHQ6NVY1 386 aaPredicted RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 LINGO4Q6UY18 593 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 ZNF783Q6ZMS7 281 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 ZNF534Q76KX8 674 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 BZW1Q7L1Q6 419 aaKnown RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 TAOK1Q7L7X3 1001 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 GSTA5Q7RTV2 222 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 KIAA0907Q7Z7F0 614 aaPredicted RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 B3GNT8Q7Z7M8 397 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 MFN1Q8IWA4 741 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 KLHDC8BQ8IXV7 354 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 ATPAF2Q8N5M1 289 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 TEX26Q8N6G2 289 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 CCDC89Q8N998 374 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 NAT8LQ8N9F0 302 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 FIBINQ8TAL6 211 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 FBXO25Q8TCJ0 367 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 AENQ8WTP8 325 aaKnown RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 DDI1Q8WTU0 396 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 IFT81Q8WYA0 676 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 ANKRD7Q92527 254 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 USP7Q93009 1102 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 ART4Q93070 314 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 FATE1Q969F0 183 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 KIAA1143Q96AT1 154 aaPredicted RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 VOPP1Q96AW1 172 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 SPATA13Q96N96 652 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 CCDC3Q9BQI4 270 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 WDR83Q9BRX9 315 aaKnown RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 FEM1AQ9BSK4 669 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms