RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 CAND1Q86VP6 1230 aaKnown RBP13.37□□□□□ -0.27
LTBR-202ENST00000440421 KRT222Q8N1A0 295 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 IL22RA1Q8N6P7 574 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 OR52E1Q8NGJ3 308 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 LKAAEAR1Q8TD35 194 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 GRK7Q8WTQ7 553 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 KLHL6Q8WZ60 621 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 UBXN4Q92575 508 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 BBC3Q96PG8 261 aaPredicted RBP13.37□□□□□ -0.27
LTBR-202ENST00000440421 TRIM56Q9BRZ2 755 aaKnown RBP13.37□□□□□ -0.27
LTBR-202ENST00000440421 SRMSQ9H3Y6 488 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 MVB12BQ9H7P6 319 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 MRM3Q9HC36 420 aaKnown RBP13.37□□□□□ -0.27
LTBR-202ENST00000440421 ASF1AQ9Y294 204 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 SLC5A10A0PJK1 596 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 GSAPA4D1B5 854 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 BHMG1C9JSJ3 638 aaPredicted RBP13.36□□□□□ -0.27
LTBR-202ENST00000440421 NDUFS3O75489 264 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 STK17BO94768 372 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 NELFEP18615 380 aaKnown RBP13.36□□□□□ -0.27
LTBR-202ENST00000440421 WT1P19544 449 aaPredicted RBP13.36□□□□□ -0.27
LTBR-202ENST00000440421 ARNTP27540 789 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 CCR7P32248 378 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 KPNA2P52292 529 aaKnown RBP13.36□□□□□ -0.27
LTBR-202ENST00000440421 HSPA14Q0VDF9 509 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 PRKAA1Q13131 559 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 KCNAB1Q14722 419 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 PTRHD1Q6GMV3 140 aaKnown RBP13.36□□□□□ -0.27
LTBR-202ENST00000440421 CACNA2D3Q8IZS8 1091 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 SIDT2Q8NBJ9 832 aaKnown RBP13.36□□□□□ -0.27
LTBR-202ENST00000440421 OR5AR1Q8NGP9 310 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 PPM1MQ96MI6 270 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 UBL7Q96S82 380 aaPredicted RBP13.36□□□□□ -0.27
LTBR-202ENST00000440421 CD180Q99467 661 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 ZPBPQ9BS86 351 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 TSSK1BQ9BXA7 367 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 DDX47Q9H0S4 455 aaKnown RBP13.36□□□□□ -0.27
LTBR-202ENST00000440421 XKR8Q9H6D3 395 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 SAMD15Q9P1V8 674 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 LAMA5O15230 3695 aa13.36□□□□□ -0.27
LTBR-202ENST00000440421 TLCD2A6NGC4 264 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 BTN3A3O00478 584 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 BTN3A1O00481 513 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 PRMT5O14744 637 aaPredicted RBP13.35□□□□□ -0.27
LTBR-202ENST00000440421 EBLN1P0CF75 366 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 FOLR1P15328 257 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 ZNF28P17035 718 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 ACADLP28330 430 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 EIF3BP55884 814 aaKnown RBP13.35□□□□□ -0.27
LTBR-202ENST00000440421 TIPARPQ7Z3E1 657 aaKnown RBP13.35□□□□□ -0.27
LTBR-202ENST00000440421 AMIGO1Q86WK6 493 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 RASGRP3Q8IV61 690 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 VRK3Q8IV63 474 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 NLGN4XQ8N0W4 816 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 NLGN4YQ8NFZ3 816 aaPredicted RBP13.35□□□□□ -0.27
LTBR-202ENST00000440421 SLC41A2Q96JW4 573 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 SERPINB12Q96P63 405 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 CARD6Q9BX69 1037 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 ULBP3Q9BZM4 244 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 SPRY4Q9C004 299 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 P2RY12Q9H244 342 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 TRIT1Q9H3H1 467 aaKnown RBP13.35□□□□□ -0.27
LTBR-202ENST00000440421 XAB2Q9HCS7 855 aaKnown RBP13.35□□□□□ -0.27
LTBR-202ENST00000440421 IL1RAPL1Q9NZN1 696 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 ASIC3Q9UHC3 531 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 PILRAQ9UKJ1 303 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 TDRKHQ9Y2W6 561 aaKnown RBP13.35□□□□□ -0.27
LTBR-202ENST00000440421 AHCTF1Q8WYP5 2266 aa13.35□□□□□ -0.27
LTBR-202ENST00000440421 SDR42E2A6NKP2 422 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 APOA4P06727 396 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 MLNP12872 115 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 LIFP15018 202 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 PAMP19021 973 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 CDH3P22223 829 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 RHDQ02161 417 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 PLOD1Q02809 727 aaPredicted RBP13.34□□□□□ -0.27
LTBR-202ENST00000440421 TUBB3Q13509 450 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 DHX34Q14147 1143 aaKnown RBP13.34□□□□□ -0.27
LTBR-202ENST00000440421 IL11RAQ14626 422 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 PAPD7Q5XG87 772 aaKnown RBP13.34□□□□□ -0.27
LTBR-202ENST00000440421 KIAA0930Q6ICG6 404 aaPredicted RBP13.34□□□□□ -0.27
LTBR-202ENST00000440421 MRNIPQ6NTE8 343 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 SDCCAG8Q86SQ7 713 aaPredicted RBP13.34□□□□□ -0.27
LTBR-202ENST00000440421 KLHL7Q8IXQ5 586 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 PPIL6Q8IXY8 311 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 TBC1D21Q8IYX1 336 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 UNC5BQ8IZJ1 945 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 NAT8LQ8N9F0 302 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 MCUQ8NE86 351 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 CFAP61Q8NHU2 1237 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 SNRNP27Q8WVK2 155 aaKnown RBP13.34□□□□□ -0.27
LTBR-202ENST00000440421 ASZ1Q8WWH4 475 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 ZNF669Q96BR6 464 aaPredicted RBP13.34□□□□□ -0.27
LTBR-202ENST00000440421 NAPGQ99747 312 aaPredicted RBP13.34□□□□□ -0.27
LTBR-202ENST00000440421 TFB2MQ9H5Q4 396 aaKnown RBP13.34□□□□□ -0.27
LTBR-202ENST00000440421 PDE7BQ9NP56 450 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 SOHLH2Q9NX45 425 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 SEMA5BQ9P283 1151 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 GNPTGQ9UJJ9 305 aa13.34□□□□□ -0.27
LTBR-202ENST00000440421 POMT2Q9UKY4 750 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms