RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 CD180Q99467 661 aa23.38■■□□□ 1.33
CPNE1-217ENST00000439669 MAP3K3Q99759 626 aa23.38■■□□□ 1.33
CPNE1-217ENST00000439669 ZPBPQ9BS86 351 aa23.38■■□□□ 1.33
CPNE1-217ENST00000439669 ASF1AQ9Y294 204 aa23.38■■□□□ 1.33
CPNE1-217ENST00000439669 SAR1BQ9Y6B6 198 aa23.38■■□□□ 1.33
CPNE1-217ENST00000439669 SDK2Q58EX2 2172 aa23.38■■□□□ 1.33
CPNE1-217ENST00000439669 SLC5A10A0PJK1 596 aa23.37■■□□□ 1.33
CPNE1-217ENST00000439669 CTAGE9A4FU28 777 aa23.37■■□□□ 1.33
CPNE1-217ENST00000439669 TLCD2A6NGC4 264 aa23.37■■□□□ 1.33
CPNE1-217ENST00000439669 SDR42E2A6NKP2 422 aa23.37■■□□□ 1.33
CPNE1-217ENST00000439669 IQCF5A8MTL0 148 aa23.37■■□□□ 1.33
CPNE1-217ENST00000439669 GOLGA8KD6RF30 607 aa23.37■■□□□ 1.33
CPNE1-217ENST00000439669 GOLGA8TH3BQL2 631 aa23.37■■□□□ 1.33
CPNE1-217ENST00000439669 POLR2CP19387 275 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-217ENST00000439669 ARL4DP49703 201 aa23.37■■□□□ 1.33
CPNE1-217ENST00000439669 ARMC3Q5W041 872 aa23.37■■□□□ 1.33
CPNE1-217ENST00000439669 KIAA0930Q6ICG6 404 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-217ENST00000439669 MRNIPQ6NTE8 343 aa23.37■■□□□ 1.33
CPNE1-217ENST00000439669 SDCCAG8Q86SQ7 713 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-217ENST00000439669 PPIL6Q8IXY8 311 aa23.37■■□□□ 1.33
CPNE1-217ENST00000439669 KRT222Q8N1A0 295 aa23.37■■□□□ 1.33
CPNE1-217ENST00000439669 OR52E1Q8NGJ3 308 aa23.37■■□□□ 1.33
CPNE1-217ENST00000439669 ZNF669Q96BR6 464 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-217ENST00000439669 OR6C1Q96RD1 312 aa23.37■■□□□ 1.33
CPNE1-217ENST00000439669 GNPTGQ9UJJ9 305 aa23.37■■□□□ 1.33
CPNE1-217ENST00000439669 IGHV5-51A0A0C4DH38 117 aa23.36■■□□□ 1.33
CPNE1-217ENST00000439669 GSAPA4D1B5 854 aa23.36■■□□□ 1.33
CPNE1-217ENST00000439669 K7ENP7 123 aa23.36■■□□□ 1.33
CPNE1-217ENST00000439669 NELFEP18615 380 aaKnown RBP23.36■■□□□ 1.33
CPNE1-217ENST00000439669 CCR7P32248 378 aa23.36■■□□□ 1.33
CPNE1-217ENST00000439669 EIF3BP55884 814 aaKnown RBP23.36■■□□□ 1.33
CPNE1-217ENST00000439669 HSPA14Q0VDF9 509 aa23.36■■□□□ 1.33
CPNE1-217ENST00000439669 TMED2Q15363 201 aa23.36■■□□□ 1.33
CPNE1-217ENST00000439669 INO80CQ6PI98 192 aaPredicted RBP23.36■■□□□ 1.33
CPNE1-217ENST00000439669 IL22RA1Q8N6P7 574 aa23.36■■□□□ 1.33
CPNE1-217ENST00000439669 NAT8LQ8N9F0 302 aa23.36■■□□□ 1.33
CPNE1-217ENST00000439669 SIDT2Q8NBJ9 832 aaKnown RBP23.36■■□□□ 1.33
CPNE1-217ENST00000439669 OR5AR1Q8NGP9 310 aa23.36■■□□□ 1.33
CPNE1-217ENST00000439669 ELMO2Q96JJ3 720 aa23.36■■□□□ 1.33
CPNE1-217ENST00000439669 TRIM56Q9BRZ2 755 aaKnown RBP23.36■■□□□ 1.33
CPNE1-217ENST00000439669 CARD6Q9BX69 1037 aa23.36■■□□□ 1.33
CPNE1-217ENST00000439669 ZFYVE26Q68DK2 2539 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 TEX51A0A1B0GUA7 166 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 BHMG1C9JSJ3 638 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-217ENST00000439669 RAD1O60671 282 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 APOA4P06727 396 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 ACADLP28330 430 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 KPNA2P52292 529 aaKnown RBP23.35■■□□□ 1.33
CPNE1-217ENST00000439669 PTK6Q13882 451 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 DHX34Q14147 1143 aaKnown RBP23.35■■□□□ 1.33
CPNE1-217ENST00000439669 LRRC6Q86X45 466 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 CREG2Q8IUH2 290 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 KLHL7Q8IXQ5 586 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 CACNA2D3Q8IZS8 1091 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 NKD1Q969G9 470 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 SLC41A2Q96JW4 573 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 PANX3Q96QZ0 392 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 P2RY12Q9H244 342 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 TRIT1Q9H3H1 467 aaKnown RBP23.35■■□□□ 1.33
CPNE1-217ENST00000439669 TFB2MQ9H5Q4 396 aaKnown RBP23.35■■□□□ 1.33
CPNE1-217ENST00000439669 XKR8Q9H6D3 395 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 SEMA5BQ9P283 1151 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 PCYOX1Q9UHG3 505 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 MAD1L1Q9Y6D9 718 aa23.35■■□□□ 1.33
CPNE1-217ENST00000439669 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.35■■□□□ 1.332e-10■□□□□ 8.4
CPNE1-217ENST00000439669 CHD6Q8TD26 2715 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 FAM237BA0A1B0GVD1 139 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 MAGEB16A2A368 324 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 MATN2O00339 956 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 PFDN6O15212 129 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 STK17BO94768 372 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 RPS3P23396 243 aaKnown RBP eCLIP23.34■■□□□ 1.335e-8■■■□□ 18.1
CPNE1-217ENST00000439669 KCNAB1Q14722 419 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 ANKRD20A4Q4UJ75 823 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 RNF187Q5TA31 235 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-217ENST00000439669 RNASEH2BQ5TBB1 312 aaKnown RBP23.34■■□□□ 1.33
CPNE1-217ENST00000439669 CYB5D1Q6P9G0 228 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 AMIGO1Q86WK6 493 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 KMT5CQ86Y97 462 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 RASGRP3Q8IV61 690 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 ASZ1Q8WWH4 475 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 SLCO2A1Q92959 643 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 RNF31Q96EP0 1072 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 UBL7Q96S82 380 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-217ENST00000439669 NRTNQ99748 197 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 IL1RAPL1Q9NZN1 696 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 POMT2Q9UKY4 750 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 TDRKHQ9Y2W6 561 aaKnown RBP23.34■■□□□ 1.33
CPNE1-217ENST00000439669 RPS6KL1Q9Y6S9 549 aa23.34■■□□□ 1.33
CPNE1-217ENST00000439669 BTN3A1O00481 513 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 DNALI1O14645 258 aaPredicted RBP23.33■■□□□ 1.33
CPNE1-217ENST00000439669 EFSO43281 561 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 OGNP20774 298 aaKnown RBP23.33■■□□□ 1.33
CPNE1-217ENST00000439669 CDH3P22223 829 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 PAFAH1B1P43034 410 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 MAGEA3P43357 314 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 TUBB3Q13509 450 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 IL11RAQ14626 422 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 TYSND1Q2T9J0 566 aa23.33■■□□□ 1.33
CPNE1-217ENST00000439669 VRK3Q8IV63 474 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms