RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 KRT20P35900 424 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 ZNF404Q494X3 552 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 SPANXN4Q5MJ08 99 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 SLC27A1Q6PCB7 646 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 CYP20A1Q6UW02 462 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 FKBP9P1Q75LS8 142 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 LRRC8DQ7L1W4 858 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 NECAB2Q7Z6G3 386 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 FAM217AQ8IXS0 508 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 OR8H2Q8N162 312 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 TCAIMQ8N3R3 496 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 LRRC52Q8N7C0 313 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 SIDT2Q8NBJ9 832 aaKnown RBP13.16□□□□□ -0.3
ACTN1-204ENST00000438964 METTL6Q8TCB7 284 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 RHBDF1Q96CC6 855 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 ACOT13Q9NPJ3 140 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 TRPV5Q9NQA5 729 aa13.16□□□□□ -0.3
ACTN1-204ENST00000438964 CXCR6O00574 342 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 NIPSNAP2O75323 286 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 STAU1O95793 577 aaKnown RBP13.15□□□□□ -0.3
ACTN1-204ENST00000438964 IFI30P13284 250 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 HOXD8P13378 290 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-204ENST00000438964 GDF5P43026 501 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 RPL34P49207 117 aaKnown RBP13.15□□□□□ -0.3
ACTN1-204ENST00000438964 FCGRTP55899 365 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 ERVPABLB-1P60509 514 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 GALNT1Q10472 559 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-204ENST00000438964 E2F2Q14209 437 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 PON2Q15165 354 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 FAM187BQ17R55 369 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 LRRC49Q8IUZ0 686 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 PSMG2Q969U7 264 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 NTAN1Q96AB6 310 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 ISG20Q96AZ6 181 aaKnown RBP13.15□□□□□ -0.3
ACTN1-204ENST00000438964 TMEM209Q96SK2 561 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 RERGLQ9H628 205 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 PARVBQ9HBI1 364 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 MRGBPQ9NV56 204 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 UBQLN1Q9UMX0 589 aaKnown RBP13.15□□□□□ -0.3
ACTN1-204ENST00000438964 ORC6Q9Y5N6 252 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 H3BRB1 525 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 GLP2RO95838 553 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 FGF4P08620 206 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 SLC10A3P09131 477 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 CCNCP24863 283 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 TGM4P49221 684 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 AP5B1Q2VPB7 878 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 BCL7AQ4VC05 210 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 GPR153Q6NV75 609 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 VTCN1Q7Z7D3 282 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 ZFAND4Q86XD8 727 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 PGBD5Q8N414 524 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 DEPDC7Q96QD5 511 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 CENPOQ9BU64 300 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 AGO3Q9H9G7 860 aaKnown RBP13.15□□□□□ -0.3
ACTN1-204ENST00000438964 BPIFA1Q9NP55 256 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 GIMAP4Q9NUV9 329 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 COQ3Q9NZJ6 369 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 ZNF221Q9UK13 617 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 NEUROG3Q9Y4Z2 214 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 MOXD2PA6NHM9 499 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 CTDSP2O14595 271 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 PRKCAP17252 672 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 HK3P52790 923 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 OR2B6P58173 313 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 SLC35A2P78381 396 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 CREMQ03060 361 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 GRIK4Q16099 956 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 HMCESQ96FZ2 354 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 KAT8Q9H7Z6 458 aaKnown RBP13.15□□□□□ -0.3
ACTN1-204ENST00000438964 SLC25A37Q9NYZ2 338 aa13.15□□□□□ -0.3
ACTN1-204ENST00000438964 FAM234BA2RU67 622 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 SMIM30A4D0T7 59 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 CASTOR2A6NHX0 329 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 AGAP5A6NIR3 686 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 TREHO43280 583 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 RGS10O43665 173 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 LRATO95237 230 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 HMBSP08397 361 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 MYL3P08590 195 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 DAPP51397 102 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 ERVK-8P63133 956 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 FOXM1Q08050 763 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 ABRAXAS2Q15018 415 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 ZMAT1Q5H9K5 638 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 MARCH8Q5T0T0 291 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 KDELC1Q6UW63 502 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 MOB2Q70IA6 237 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 NRARPQ7Z6K4 114 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 DPP9Q86TI2 863 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 CACTIN-AS1Q8N1I8 211 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 SVOPQ8N4V2 548 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 FYTTD1Q96QD9 318 aaKnown RBP13.14□□□□□ -0.31
ACTN1-204ENST00000438964 UGT2B28Q9BY64 529 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 SP110Q9HB58 689 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 ZNF112Q9UJU3 913 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 PLXNA1Q9UIW2 1896 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 SCN4AP35499 1836 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 TNFRSF10AO00220 468 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 KMOO15229 486 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms