RNA–Protein interactions for RNA: ENST00000437679.3

LIMS3-201, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LIMS3, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-201ENST00000437679 CYB5D1Q6P9G0 228 aa14.79□□□□□ -0.04
LIMS3-201ENST00000437679 LRRC6Q86X45 466 aa14.79□□□□□ -0.04
LIMS3-201ENST00000437679 DTX1Q86Y01 620 aa14.79□□□□□ -0.04
LIMS3-201ENST00000437679 PPIL6Q8IXY8 311 aa14.79□□□□□ -0.04
LIMS3-201ENST00000437679 PHC3Q8NDX5 983 aa14.79□□□□□ -0.04
LIMS3-201ENST00000437679 ASZ1Q8WWH4 475 aa14.79□□□□□ -0.04
LIMS3-201ENST00000437679 KLHL6Q8WZ60 621 aa14.79□□□□□ -0.04
LIMS3-201ENST00000437679 SERPINB12Q96P63 405 aa14.79□□□□□ -0.04
LIMS3-201ENST00000437679 CARD6Q9BX69 1037 aa14.79□□□□□ -0.04
LIMS3-201ENST00000437679 SIDT1Q9NXL6 827 aaKnown RBP14.79□□□□□ -0.04
LIMS3-201ENST00000437679 ASIC3Q9UHC3 531 aa14.79□□□□□ -0.04
LIMS3-201ENST00000437679 PCYOX1Q9UHG3 505 aa14.79□□□□□ -0.04
LIMS3-201ENST00000437679 GNPTGQ9UJJ9 305 aa14.79□□□□□ -0.04
LIMS3-201ENST00000437679 ASF1AQ9Y294 204 aa14.79□□□□□ -0.04
LIMS3-201ENST00000437679 CACNA1GO43497 2377 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 FAM237BA0A1B0GVD1 139 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 TLCD2A6NGC4 264 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 MATN2O00339 956 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 APOA4P06727 396 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 NELFEP18615 380 aaKnown RBP14.78□□□□□ -0.04
LIMS3-201ENST00000437679 POLR2CP19387 275 aaPredicted RBP14.78□□□□□ -0.04
LIMS3-201ENST00000437679 ARNTP27540 789 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 PAFAH1B1P43034 410 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 ARCN1P48444 511 aaKnown RBP14.78□□□□□ -0.04
LIMS3-201ENST00000437679 ARL4DP49703 201 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 CSE1LP55060 971 aaKnown RBP14.78□□□□□ -0.04
LIMS3-201ENST00000437679 PRKG2Q13237 762 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 TMED2Q15363 201 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 RNF187Q5TA31 235 aaPredicted RBP14.78□□□□□ -0.04
LIMS3-201ENST00000437679 NAPRTQ6XQN6 538 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 KMT5CQ86Y97 462 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 NAT8LQ8N9F0 302 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 SIDT2Q8NBJ9 832 aaKnown RBP14.78□□□□□ -0.04
LIMS3-201ENST00000437679 OR52E1Q8NGJ3 308 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 SLCO2A1Q92959 643 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 RUNDC3BQ96NL0 473 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 PANX3Q96QZ0 392 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 OR6C1Q96RD1 312 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 MAP3K3Q99759 626 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 HGH1Q9BTY7 390 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 TRIT1Q9H3H1 467 aaKnown RBP14.78□□□□□ -0.04
LIMS3-201ENST00000437679 TFB2MQ9H5Q4 396 aaKnown RBP14.78□□□□□ -0.04
LIMS3-201ENST00000437679 APMAPQ9HDC9 416 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 SEMA5BQ9P283 1151 aa14.78□□□□□ -0.04
LIMS3-201ENST00000437679 NBEAQ8NFP9 2946 aa14.77□□□□□ -0.04
LIMS3-201ENST00000437679 IGHV5-51A0A0C4DH38 117 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 TEX51A0A1B0GUA7 166 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 IQCF5A8MTL0 148 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 GOLGA8KD6RF30 607 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 GOLGA8TH3BQL2 631 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 K7ENP7 123 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 RAD1O60671 282 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 RPS3P23396 243 aaKnown RBP eCLIP14.77□□□□□ -0.05
LIMS3-201ENST00000437679 ACADLP28330 430 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 CCR7P32248 378 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 EIF3BP55884 814 aaKnown RBP14.77□□□□□ -0.05
LIMS3-201ENST00000437679 SH3BP2P78314 561 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 HSPA14Q0VDF9 509 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 PTK6Q13882 451 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 DHX34Q14147 1143 aaKnown RBP14.77□□□□□ -0.05
LIMS3-201ENST00000437679 IL11RAQ14626 422 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 ANKRD20A4Q4UJ75 823 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 INO80CQ6PI98 192 aaPredicted RBP14.77□□□□□ -0.05
LIMS3-201ENST00000437679 SYDE1Q6ZW31 735 aaPredicted RBP14.77□□□□□ -0.05
LIMS3-201ENST00000437679 PCGF5Q86SE9 256 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 CREG2Q8IUH2 290 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 TBC1D21Q8IYX1 336 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 CACNA2D3Q8IZS8 1091 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 CARFQ8N187 725 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 KRT222Q8N1A0 295 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 IL22RA1Q8N6P7 574 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 GSDMBQ8TAX9 411 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 NKD1Q969G9 470 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 ZNF669Q96BR6 464 aaPredicted RBP14.77□□□□□ -0.05
LIMS3-201ENST00000437679 SLC41A2Q96JW4 573 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 TCF12Q99081 682 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 P2RY12Q9H244 342 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 RNF14Q9UBS8 474 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 POLG2Q9UHN1 485 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 MAD1L1Q9Y6D9 718 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.77□□□□□ -0.05
LIMS3-201ENST00000437679 RPS6KL1Q9Y6S9 549 aa14.77□□□□□ -0.05
LIMS3-201ENST00000437679 GSAPA4D1B5 854 aa14.76□□□□□ -0.05
LIMS3-201ENST00000437679 BHMG1C9JSJ3 638 aaPredicted RBP14.76□□□□□ -0.05
LIMS3-201ENST00000437679 DNALI1O14645 258 aaPredicted RBP14.76□□□□□ -0.05
LIMS3-201ENST00000437679 KPNA5O15131 536 aa14.76□□□□□ -0.05
LIMS3-201ENST00000437679 KDM1AO60341 852 aa14.76□□□□□ -0.05
LIMS3-201ENST00000437679 STK17BO94768 372 aa14.76□□□□□ -0.05
LIMS3-201ENST00000437679 OGNP20774 298 aaKnown RBP14.76□□□□□ -0.05
LIMS3-201ENST00000437679 MAGEA3P43357 314 aa14.76□□□□□ -0.05
LIMS3-201ENST00000437679 ACY1Q03154 408 aa14.76□□□□□ -0.05
LIMS3-201ENST00000437679 THOC5Q13769 683 aaKnown RBP14.76□□□□□ -0.05
LIMS3-201ENST00000437679 TYSND1Q2T9J0 566 aa14.76□□□□□ -0.05
LIMS3-201ENST00000437679 DNAJC21Q5F1R6 531 aaKnown RBP14.76□□□□□ -0.05
LIMS3-201ENST00000437679 RNASEH2BQ5TBB1 312 aaKnown RBP14.76□□□□□ -0.05
LIMS3-201ENST00000437679 NEPROQ6NW34 567 aa14.76□□□□□ -0.05
LIMS3-201ENST00000437679 VASH2Q86V25 355 aa14.76□□□□□ -0.05
LIMS3-201ENST00000437679 AMIGO1Q86WK6 493 aa14.76□□□□□ -0.05
LIMS3-201ENST00000437679 RASGRP3Q8IV61 690 aa14.76□□□□□ -0.05
LIMS3-201ENST00000437679 KLHL7Q8IXQ5 586 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms