RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 PKP2Q99959 881 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 SLC39A8Q9C0K1 460 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 C3orf14Q9HBI5 128 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 GULP1Q9UBP9 304 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 NOCTQ9UK39 431 aaKnown RBP14.28□□□□□ -0.12
PTPRU-204ENST00000428026 IGLV3-22A0A075B6J6 115 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 SMIM28A0A1B0GU29 152 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 TCRBV7S3A2A0A539 114 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 ZNF806P0C7X5 589 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 CSTF1Q05048 431 aaKnown RBP14.27□□□□□ -0.12
PTPRU-204ENST00000428026 NAE1Q13564 534 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 RUNDC3AQ59EK9 446 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 ZBTB8BQ8NAP8 495 aaPredicted RBP14.27□□□□□ -0.12
PTPRU-204ENST00000428026 SIDT2Q8NBJ9 832 aaKnown RBP14.27□□□□□ -0.12
PTPRU-204ENST00000428026 OR52B2Q96RD2 323 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 C1QTNF7Q9BXJ2 289 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 NMUR1Q9HB89 426 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 CTPS2Q9NRF8 586 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 PLK2Q9NYY3 685 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 AMD1P17707 334 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 LAG3P18627 525 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 ITPKBP27987 946 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 TARBP2Q15633 366 aaKnown RBP14.27□□□□□ -0.12
PTPRU-204ENST00000428026 LINGO2Q7L985 606 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 TFAP2BQ92481 460 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 SLC9A6Q92581 669 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 AP2M1Q96CW1 435 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 C11orf49Q9H6J7 331 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 INTS10Q9NVR2 710 aaKnown RBP14.27□□□□□ -0.12
PTPRU-204ENST00000428026 DNAJB9Q9UBS3 223 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 PTCH2Q9Y6C5 1203 aa14.27□□□□□ -0.12
PTPRU-204ENST00000428026 GLYATL1P3A0A0U1RQE8 302 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 TRIM64CA6NLI5 447 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 HERC3Q15034 1050 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 SFT2D3Q587I9 215 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 BRMS1LQ5PSV4 323 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 PDE12Q6L8Q7 609 aaKnown RBP14.27□□□□□ -0.13
PTPRU-204ENST00000428026 RTL4Q6ZR62 310 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 CHSY3Q70JA7 882 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 UNC5BQ8IZJ1 945 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 ZNF248Q8NDW4 579 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 ZNF317Q96PQ6 595 aaPredicted RBP14.27□□□□□ -0.13
PTPRU-204ENST00000428026 NIFKQ9BYG3 293 aaKnown RBP14.27□□□□□ -0.13
PTPRU-204ENST00000428026 POLR2J2Q9GZM3 115 aaKnown RBP14.27□□□□□ -0.13
PTPRU-204ENST00000428026 RNF38Q9H0F5 515 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 GOT2P00505 430 aaKnown RBP14.27□□□□□ -0.13
PTPRU-204ENST00000428026 SLC35G4P0C7Q5 338 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 CTSEP14091 401 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 ATXN1P54253 815 aaKnown RBP14.27□□□□□ -0.13
PTPRU-204ENST00000428026 TXNL4AP83876 142 aaKnown RBP14.27□□□□□ -0.13
PTPRU-204ENST00000428026 GANABQ14697 944 aaKnown RBP14.27□□□□□ -0.13
PTPRU-204ENST00000428026 CAPN13Q6MZZ7 669 aaPredicted RBP14.27□□□□□ -0.13
PTPRU-204ENST00000428026 BEND5Q7L4P6 421 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 FRMD6Q96NE9 622 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 GPER1Q99527 375 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 ANKRA2Q9H9E1 313 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 OSER1Q9NX31 292 aa14.27□□□□□ -0.13
PTPRU-204ENST00000428026 NME6O75414 186 aaPredicted RBP14.26□□□□□ -0.13
PTPRU-204ENST00000428026 GLUD2P49448 558 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 RORCP51449 518 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 ALG11Q2TAA5 492 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 SH3PXD2AQ5TCZ1 1133 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 FAM91A1Q658Y4 838 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 SLC43A3Q8NBI5 491 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 RERGQ96A58 199 aaPredicted RBP14.26□□□□□ -0.13
PTPRU-204ENST00000428026 RNF31Q96EP0 1072 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 ERMAPQ96PL5 475 aaPredicted RBP14.26□□□□□ -0.13
PTPRU-204ENST00000428026 STXBP5LQ9Y2K9 1186 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 RAI2Q9Y5P3 530 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 MAGEB17A8MXT2 336 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 GABBR2O75899 941 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 KRT33AO76009 404 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 OR4Q2P0C623 313 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 RPIAP49247 311 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 RGS8P57771 180 aaPredicted RBP14.26□□□□□ -0.13
PTPRU-204ENST00000428026 SLC18A2Q05940 514 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 DUSP4Q13115 394 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 CBFBQ13951 182 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 DAG1Q14118 895 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 WSCD2Q2TBF2 565 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 DCAF12L1Q5VU92 463 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 CADM2Q8N3J6 435 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 OR5K1Q8NHB7 308 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 FAM110BQ8TC76 370 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 MAN2B2Q9Y2E5 1009 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 SLC45A1Q9Y2W3 748 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 A0A1W2PQ67 120 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 NPHS1O60500 1241 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 RABGGTBP53611 331 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 AIF1P55008 147 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 MC1RQ01726 317 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 LINGO4Q6UY18 593 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 JAZF1Q86VZ6 243 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 DQX1Q8TE96 717 aaKnown RBP14.26□□□□□ -0.13
PTPRU-204ENST00000428026 SLC13A3Q8WWT9 602 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 ARNTL2Q8WYA1 636 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 CREBZFQ9NS37 354 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 IMP3Q9NV31 184 aaKnown RBP14.26□□□□□ -0.13
PTPRU-204ENST00000428026 NUDT4Q9NZJ9 180 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 NUP50Q9UKX7 468 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms