RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 TYSND1Q2T9J0 566 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 DNAJC21Q5F1R6 531 aaKnown RBP18.2■□□□□ 0.5
PRNP-202ENST00000424424 NAPRTQ6XQN6 538 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 FAM92BQ6ZTR7 304 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 PRSS42Q7Z5A4 293 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 PHC3Q8NDX5 983 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 OR4E2Q8NGC2 313 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 GSDMBQ8TAX9 411 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 LCN9Q8WX39 176 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 STAMBPL1Q96FJ0 436 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 TEFMQ96QE5 360 aaKnown RBP18.2■□□□□ 0.5
PRNP-202ENST00000424424 CD180Q99467 661 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 P2RY12Q9H244 342 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 SRMSQ9H3Y6 488 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 ZNF768Q9H5H4 540 aaKnown RBP18.2■□□□□ 0.5
PRNP-202ENST00000424424 FBXO8Q9NRD0 319 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 ASF1AQ9Y294 204 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 PCDHB11Q9Y5F2 797 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 PCDHGA3Q9Y5H0 932 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 OR6C74A6NCV1 312 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 IQCF5A8MTL0 148 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 H3BMM5 538 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 MATN2O00339 956 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 NDC80O14777 642 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 TTI1O43156 1089 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 CCR7P32248 378 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 SEPHS1P49903 392 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 CSE1LP55060 971 aaKnown RBP18.19■□□□□ 0.5
PRNP-202ENST00000424424 UCNP55089 124 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 MC2RQ01718 297 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 LONRF1Q17RB8 773 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 COL28A1Q2UY09 1125 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 DNTTIP2Q5QJE6 756 aaKnown RBP18.19■□□□□ 0.5
PRNP-202ENST00000424424 CYB5D1Q6P9G0 228 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 CEACAM20Q6UY09 585 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 LMNTD2Q8IXW0 634 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 TBC1D21Q8IYX1 336 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 KRT222Q8N1A0 295 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 GABPB2Q8TAK5 448 aaPredicted RBP18.19■□□□□ 0.5
PRNP-202ENST00000424424 CALML6Q8TD86 181 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 UBXN4Q92575 508 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 FCRL3Q96P31 734 aaPredicted RBP18.19■□□□□ 0.5
PRNP-202ENST00000424424 KRT12Q99456 494 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 ZPBPQ9BS86 351 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 NAT9Q9BTE0 207 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 TRIT1Q9H3H1 467 aaKnown RBP18.19■□□□□ 0.5
PRNP-202ENST00000424424 TFB2MQ9H5Q4 396 aaKnown RBP18.19■□□□□ 0.5
PRNP-202ENST00000424424 WDR70Q9NW82 654 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 POLG2Q9UHN1 485 aa18.19■□□□□ 0.5
PRNP-202ENST00000424424 TTC4O95801 387 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 ESR1P03372 595 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 RPN2P04844 631 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 LIPCP11150 499 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 PGAM1P18669 254 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 IVDP26440 423 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 AOAHP28039 575 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 ACADLP28330 430 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 FMO4P31512 558 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 ADARP55265 1226 aaKnown RBP18.18■□□□□ 0.5
PRNP-202ENST00000424424 PRKG2Q13237 762 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 OTOAQ7RTW8 1153 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 CILP2Q8IUL8 1156 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 SLC22A15Q8IZD6 547 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 PDIK1LQ8N165 341 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 BMPERQ8N8U9 685 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.18■□□□□ 0.5
PRNP-202ENST00000424424 OR52E1Q8NGJ3 308 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 SNF8Q96H20 258 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 TRIM56Q9BRZ2 755 aaKnown RBP18.18■□□□□ 0.5
PRNP-202ENST00000424424 TRIM51Q9BSJ1 452 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 HGH1Q9BTY7 390 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 C20orf96Q9NUD7 363 aaPredicted RBP18.18■□□□□ 0.5
PRNP-202ENST00000424424 INTS10Q9NVR2 710 aaKnown RBP18.18■□□□□ 0.5
PRNP-202ENST00000424424 FOXJ2Q9P0K8 574 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 CRYL1Q9Y2S2 319 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 FAM169AQ9Y6X4 670 aa18.18■□□□□ 0.5
PRNP-202ENST00000424424 CACNA1GO43497 2377 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 ZCWPW2A0A1B0GU75 182 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 TLCD2A6NGC4 264 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 EFCAB8A8MWE9 144 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 BHMG1C9JSJ3 638 aaPredicted RBP18.17■□□□□ 0.5
PRNP-202ENST00000424424 STMND1H3BQB6 276 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 POLR1CO15160 346 aaPredicted RBP18.17■□□□□ 0.5
PRNP-202ENST00000424424 KIF1CO43896 1103 aaKnown RBP18.17■□□□□ 0.5
PRNP-202ENST00000424424 GPC4O75487 556 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 POLR2CP19387 275 aaPredicted RBP18.17■□□□□ 0.5
PRNP-202ENST00000424424 ARL4DP49703 201 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 TLE3Q04726 772 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 FOXM1Q08050 763 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 DHX9Q08211 1270 aaKnown RBP18.17■□□□□ 0.5
PRNP-202ENST00000424424 BBS9Q3SYG4 887 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 ANKS6Q68DC2 871 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 ZNF470Q6ECI4 717 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 MAATS1Q7Z4T9 603 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 AMIGO1Q86WK6 493 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 BBOF1Q8ND07 529 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 SPATA4Q8NEY3 305 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 OR5AR1Q8NGP9 310 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 OR5K2Q8NHB8 316 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 LKAAEAR1Q8TD35 194 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms