RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 CD244Q9BZW8 370 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 CLMPQ9H6B4 373 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 CARS2Q9HA77 564 aaKnown RBP8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 USE1Q9NZ43 259 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 KLHL42Q9P2K6 505 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 ZNHIT2Q9UHR6 403 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 MAN2B2Q9Y2E5 1009 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 AP3M1Q9Y2T2 418 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 PCDHGA11Q9Y5H2 935 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 CXorf51AA0A1B0GTR3 108 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 K7EPI3 171 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 EIF3FO00303 357 aaPredicted RBP8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 DFNA5O60443 496 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 CLIC3O95833 236 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 MT-ND1P03886 318 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 EBLN1P0CF75 366 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 MBL2P11226 248 aaPredicted RBP8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 BPIP17213 487 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 IL1RNP18510 177 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 PRPH2P23942 346 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 CASP2P42575 452 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 MAPK8P45983 427 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 PTPN5P54829 565 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 ESRRGP62508 458 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 CYP4F3Q08477 520 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 GRSF1Q12849 480 aaKnown RBP eCLIP8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 DCTN2Q13561 401 aaKnown RBP8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 GBX1Q14549 363 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 PTGR1Q14914 329 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 NKG7Q16617 165 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 AAK1Q2M2I8 961 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 GPR33Q49SQ1 333 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 USP39Q53GS9 565 aaKnown RBP8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 RUNDC3AQ59EK9 446 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 CCNYL2Q5T2Q4 361 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 LRIF1Q5T3J3 769 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 TTC23LQ6PF05 361 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 TPGS1Q6ZTW0 290 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 RALGPS2Q86X27 583 aaPredicted RBP8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 CALHM3Q86XJ0 350 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 CLVS1Q8IUQ0 354 aaPredicted RBP8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 NXPE1Q8N323 547 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 ZBTB2Q8N680 514 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 TERB1Q8NA31 727 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 DRAXINQ8NBI3 349 aaPredicted RBP8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 B4GALNT2Q8NHY0 566 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 ITFG1Q8TB96 612 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 MAGEE2Q8TD90 523 aaPredicted RBP8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 GFM2Q969S9 779 aaKnown RBP8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 TMBIM1Q969X1 311 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 C12orf43Q96C57 262 aaKnown RBP8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 VPS50Q96JG6 964 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 RNF145Q96MT1 663 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 HHIPQ96QV1 700 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 SEPHS2Q99611 448 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 TUBA1CQ9BQE3 449 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 HERC2P3Q9BVR0 1158 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 HIPK3Q9H422 1215 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 IKZF5Q9H5V7 419 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 ASB8Q9H765 288 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 ZFYVE1Q9HBF4 777 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 IL26Q9NPH9 171 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 SLC25A37Q9NYZ2 338 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 TMEM9Q9P0T7 183 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 OPTCQ9UBM4 332 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 EBF1Q9UH73 591 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 FNDC3AQ9Y2H6 1198 aaKnown RBP8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 C2orf16Q68DN1 1984 aa8.56□□□□□ -1.04
TRIM49D1-201ENST00000420869 GLYATL1P3A0A0U1RQE8 302 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 C1orf232A0A0U1RR37 186 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 FAM220BPB1ANY3 271 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 MANBAO00462 879 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 SMAD6O43541 496 aaKnown RBP8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 ZNF821O75541 412 aaPredicted RBP8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 SLC25A14O95258 325 aaPredicted RBP8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 SOD2P04179 222 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 INHAP05111 366 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 IL6P05231 212 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 RETP07949 1114 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 CBSLP0DN79 551 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 THRBP10828 461 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 BMP1P13497 986 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 TCF3P15923 654 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 EPORP19235 508 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 AKT1P31749 480 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 SHMT2P34897 504 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 CBSP35520 551 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 GGT5P36269 586 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 SPAM1P38567 509 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 PIK3CGP48736 1102 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 GZMMP51124 257 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 NUP107P57740 925 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 SMAD3P84022 425 aaKnown RBP8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 ZXDBP98169 803 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 PPP2R2BQ00005 443 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 PMS2P3Q13401 168 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 BIRC2Q13490 618 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 BOP1Q14137 746 aaKnown RBP8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 RAB39AQ14964 217 aa8.55□□□□□ -1.04
TRIM49D1-201ENST00000420869 GGTA1PQ4G0N0 100 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms