RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 NMBRP28336 390 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 HOXD9P28356 352 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-204ENST00000412061 TIA1P31483 386 aaKnown RBP eCLIP4.41□□□□□ -1.7
BRCA1-204ENST00000412061 ARHGAP25P42331 645 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 GALK2Q01415 458 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 ZNF91Q05481 1191 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 DAZAP2Q15038 168 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-204ENST00000412061 MAPK11Q15759 364 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 UGP2Q16851 508 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 ESCO2Q56NI9 601 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 C6orf10Q5SRN2 563 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 PAPD7Q5XG87 772 aaKnown RBP4.41□□□□□ -1.7
BRCA1-204ENST00000412061 OR6B2Q6IFH4 312 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 FAM198BQ6UWH4 519 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 PQLC2Q6ZP29 291 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 MTSS1LQ765P7 747 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 ARMCX2Q7L311 632 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 PRSS42Q7Z5A4 293 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 PIGWQ7Z7B1 504 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 SERPINA11Q86U17 422 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 ZDHHC23Q8IYP9 409 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 PARP16Q8N5Y8 322 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 SLC44A5Q8NCS7 719 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 AGBL3Q8NEM8 1001 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 BEST2Q8NFU1 509 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 WDR20Q8TBZ3 569 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 WIPF2Q8TF74 440 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-204ENST00000412061 UBLCP1Q8WVY7 318 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-204ENST00000412061 IGFBPL1Q8WX77 278 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 RAD54LQ92698 747 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 THRSPQ92748 146 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 RIT1Q92963 219 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 EME1Q96AY2 570 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 OTUB1Q96FW1 271 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-204ENST00000412061 NSMCE2Q96MF7 247 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 ZNF570Q96NI8 536 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 NAP1L3Q99457 506 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-204ENST00000412061 ACPTQ9BZG2 426 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 FN3KQ9H479 309 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 PALMDQ9NP74 551 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 PNRC2Q9NPJ4 139 aaKnown RBP4.41□□□□□ -1.7
BRCA1-204ENST00000412061 GPR108Q9NPR9 543 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 DDX4Q9NQI0 724 aaKnown RBP4.41□□□□□ -1.7
BRCA1-204ENST00000412061 KLHL1Q9NR64 748 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 ADARB2Q9NS39 739 aaKnown RBP4.41□□□□□ -1.7
BRCA1-204ENST00000412061 THSD1Q9NS62 852 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 ATAD3AQ9NVI7 634 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 FAM118AQ9NWS6 357 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 TBC1D7Q9P0N9 293 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 ANKMY1Q9P2S6 941 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 PLEKHB1Q9UF11 243 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-204ENST00000412061 DBNLQ9UJU6 430 aaKnown RBP4.41□□□□□ -1.7
BRCA1-204ENST00000412061 RNF150Q9ULK6 438 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 SLC4A4Q9Y6R1 1079 aa4.41□□□□□ -1.7
BRCA1-204ENST00000412061 TRBV2A0A0J9YWF9 115 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 RBMXL2O75526 392 aaKnown RBP4.4□□□□□ -1.71
BRCA1-204ENST00000412061 OR6B1O95007 311 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 PGLSO95336 258 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 LCATP04180 440 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 TFPIP10646 304 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 KRT5P13647 590 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 IL4RP24394 825 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 PSMB4P28070 264 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 CCND2P30279 289 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 TNNT2P45379 298 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-204ENST00000412061 GPR12P47775 334 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 GMPSP49915 693 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-204ENST00000412061 SMSP52788 366 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 GBX2P52951 348 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-204ENST00000412061 POLR2LP62875 67 aaKnown RBP4.4□□□□□ -1.71
BRCA1-204ENST00000412061 PMP22Q01453 160 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 GAD2Q05329 585 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 CETN1Q12798 172 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 TNK1Q13470 666 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 RIPK1Q13546 671 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 RAPSNQ13702 412 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 PKP1Q13835 747 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 SMTNL2Q2TAL5 461 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 LBHQ53QV2 105 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-204ENST00000412061 BOLA3Q53S33 107 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 LRRC73Q5JTD7 316 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 TXNRD3NBQ6F5E7 133 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 RAET1GQ6H3X3 334 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 NCAPH2Q6IBW4 605 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 SLC18B1Q6NT16 456 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 PAPD4Q6PIY7 484 aaKnown RBP4.4□□□□□ -1.71
BRCA1-204ENST00000412061 AFTPHQ6ULP2 937 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 LINGO2Q7L985 606 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 YTHDF3Q7Z739 585 aaKnown RBP4.4□□□□□ -1.71
BRCA1-204ENST00000412061 CCDC190Q86UF4 302 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 ANKRD13CQ8N6S4 541 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 BANPQ8N9N5 519 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 CLEC1AQ8NC01 280 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 EXD1Q8NHP7 514 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 B4GALNT2Q8NHY0 566 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 HM13Q8TCT9 377 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 SLC5A11Q8WWX8 675 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 SNAPC3Q92966 411 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 SLC25A28Q96A46 364 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms