RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 SPRED1Q7Z699 444 aa24.87■■□□□ 1.57
U2AF1-203ENST00000398137 Q8N9G6 341 aaPredicted RBP24.87■■□□□ 1.57
U2AF1-203ENST00000398137 WDR36Q8NI36 951 aaKnown RBP24.87■■□□□ 1.57
U2AF1-203ENST00000398137 CDKL2Q92772 493 aa24.87■■□□□ 1.57
U2AF1-203ENST00000398137 FAM136AQ96C01 138 aa24.87■■□□□ 1.57
U2AF1-203ENST00000398137 TSSK1BQ9BXA7 367 aa24.87■■□□□ 1.57
U2AF1-203ENST00000398137 LRIT1Q9P2V4 623 aa24.87■■□□□ 1.57
U2AF1-203ENST00000398137 ATXN7L1Q9ULK2 861 aaPredicted RBP24.87■■□□□ 1.57
U2AF1-203ENST00000398137 CCDC187A0A096LP49 1063 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 C1QAP02745 245 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 AHSGP02765 367 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 GSTM1P09488 218 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 PREPP48147 710 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 CD151P48509 253 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 GSTM4Q03013 218 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 EFTUD2Q15029 972 aaKnown RBP eCLIP24.86■■□□□ 1.572e-7■■■■■ 46.8
U2AF1-203ENST00000398137 BRD3Q15059 726 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 SYTL3Q4VX76 610 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 ZNF549Q6P9A3 640 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 GALNT7Q86SF2 657 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 CFAP206Q8IYR0 622 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 NAGSQ8N159 534 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 CCDC68Q9H2F9 335 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 THSD1Q9NS62 852 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 PSMD13Q9UNM6 376 aa24.86■■□□□ 1.57
U2AF1-203ENST00000398137 TRBV23OR9-2A0A075B6M9 112 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 C17orf113A0A1B0GUU1 675 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 H3BMM5 538 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 B4GAT1O43505 415 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 NUDT21O43809 227 aaKnown RBP24.85■■□□□ 1.57
U2AF1-203ENST00000398137 F3P13726 295 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 CCKBRP32239 447 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 CCR7P32248 378 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 PHBP35232 272 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 CSE1LP55060 971 aaKnown RBP24.85■■□□□ 1.57
U2AF1-203ENST00000398137 ZFP36L1Q07352 338 aaKnown RBP24.85■■□□□ 1.57
U2AF1-203ENST00000398137 KBTBD12Q3ZCT8 623 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 METRNLQ641Q3 311 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 FOXR1Q6PIV2 292 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 CYS1Q717R9 158 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 ZNF438Q7Z4V0 828 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 STRA8Q7Z7C7 330 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 CLEC14AQ86T13 490 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 SLC26A11Q86WA9 606 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 CTAGE3PQ8IX95 158 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 PANX3Q96QZ0 392 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 NDNQ99608 321 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 TXLNGYQ9BZA5 131 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 SARS2Q9NP81 518 aaKnown RBP24.85■■□□□ 1.57
U2AF1-203ENST00000398137 NSMCE4AQ9NXX6 385 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 SCHIP1Q9P0W5 487 aaPredicted RBP24.85■■□□□ 1.57
U2AF1-203ENST00000398137 WDR37Q9Y2I8 494 aa24.85■■□□□ 1.57
U2AF1-203ENST00000398137 TNFSF15O95150 251 aa24.84■■□□□ 1.57
U2AF1-203ENST00000398137 BRAFP15056 766 aa24.84■■□□□ 1.57
U2AF1-203ENST00000398137 PMS2P54278 862 aa24.84■■□□□ 1.57
U2AF1-203ENST00000398137 COL9A2Q14055 689 aaPredicted RBP24.84■■□□□ 1.57
U2AF1-203ENST00000398137 NAA30Q147X3 362 aaPredicted RBP24.84■■□□□ 1.57
U2AF1-203ENST00000398137 RBM20Q5T481 1227 aaKnown RBP24.84■■□□□ 1.57
U2AF1-203ENST00000398137 AGAP9Q5VTM2 703 aa24.84■■□□□ 1.57
U2AF1-203ENST00000398137 PPM1NQ8N819 430 aa24.84■■□□□ 1.57
U2AF1-203ENST00000398137 SLC37A2Q8TED4 501 aa24.84■■□□□ 1.57
U2AF1-203ENST00000398137 WWP1Q9H0M0 922 aa24.84■■□□□ 1.57
U2AF1-203ENST00000398137 ATRXP46100 2492 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 E5RI56 91 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 LIN7AO14910 233 aaPredicted RBP24.83■■□□□ 1.57
U2AF1-203ENST00000398137 SLC35G4P0C7Q5 338 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 HGFP14210 728 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 SLC2A4P14672 509 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 CHRM3P20309 590 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 RBMS1P29558 406 aaKnown RBP24.83■■□□□ 1.57
U2AF1-203ENST00000398137 INHBCP55103 352 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 NR1D2Q14995 579 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 TMED2Q15363 201 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 WDR93Q6P2C0 686 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 IYDQ6PHW0 289 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 TRMT10CQ7L0Y3 403 aaKnown RBP24.83■■□□□ 1.57
U2AF1-203ENST00000398137 SLITRK4Q8IW52 837 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 ARL14Q8N4G2 192 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 GPATCH11Q8N954 259 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 UHMK1Q8TAS1 419 aaKnown RBP24.83■■□□□ 1.57
U2AF1-203ENST00000398137 KCNE4Q8WWG9 221 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.83■■□□□ 1.57
U2AF1-203ENST00000398137 RMDN2Q96LZ7 410 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 AARSD1Q9BTE6 412 aaKnown RBP24.83■■□□□ 1.57
U2AF1-203ENST00000398137 ACSL5Q9ULC5 683 aa24.83■■□□□ 1.57
U2AF1-203ENST00000398137 OR52A4PA6NMU1 304 aa24.82■■□□□ 1.56
U2AF1-203ENST00000398137 PLD2O14939 933 aa24.82■■□□□ 1.56
U2AF1-203ENST00000398137 AOAHP28039 575 aa24.82■■□□□ 1.56
U2AF1-203ENST00000398137 PDHA2P29803 388 aa24.82■■□□□ 1.56
U2AF1-203ENST00000398137 HALP42357 657 aa24.82■■□□□ 1.56
U2AF1-203ENST00000398137 PCSK4Q6UW60 755 aa24.82■■□□□ 1.56
U2AF1-203ENST00000398137 ABRAXAS1Q6UWZ7 409 aa24.82■■□□□ 1.56
U2AF1-203ENST00000398137 WASH2PQ6VEQ5 465 aa24.82■■□□□ 1.56
U2AF1-203ENST00000398137 RAB11FIP2Q7L804 512 aa24.82■■□□□ 1.56
U2AF1-203ENST00000398137 ZC3HC1Q86WB0 502 aaKnown RBP24.82■■□□□ 1.56
U2AF1-203ENST00000398137 SFRP1Q8N474 314 aa24.82■■□□□ 1.56
U2AF1-203ENST00000398137 SPDYE1Q8NFV5 336 aaPredicted RBP24.82■■□□□ 1.56
U2AF1-203ENST00000398137 PARD6BQ9BYG5 372 aa24.82■■□□□ 1.56
U2AF1-203ENST00000398137 ACSS3Q9H6R3 686 aa24.82■■□□□ 1.56
U2AF1-203ENST00000398137 CPNE5Q9HCH3 593 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms