RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 NMBRP28336 390 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 PRAMEP78395 509 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 ANKRD20A4Q4UJ75 823 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 SPANXN3Q5MJ09 141 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 TSTD2Q5T7W7 516 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 LRRC66Q68CR7 880 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 HIST2H2BCQ6DN03 193 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 C16orf46Q6P387 395 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 C3orf62Q6ZUJ4 267 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 TRMT10CQ7L0Y3 403 aaKnown RBP13.4□□□□□ -0.26
SEC13-205ENST00000397101 TMC3Q7Z5M5 1100 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 TSPAN33Q86UF1 283 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 IGDCC3Q8IVU1 814 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 APLFQ8IW19 511 aaPredicted RBP13.4□□□□□ -0.26
SEC13-205ENST00000397101 OTUD6BQ8N6M0 293 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 EFCAB3Q8N7B9 438 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 OR4K2Q8NGD2 314 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 UHMK1Q8TAS1 419 aaKnown RBP13.4□□□□□ -0.26
SEC13-205ENST00000397101 STYXQ8WUJ0 223 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 PTCD2Q8WV60 388 aaKnown RBP13.4□□□□□ -0.26
SEC13-205ENST00000397101 CAVIN3Q969G5 261 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 CTRCQ99895 268 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 KIFC1Q9BW19 673 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 APMAPQ9HDC9 416 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 ARFGAP3Q9NP61 516 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 SIDT1Q9NXL6 827 aaKnown RBP13.4□□□□□ -0.26
SEC13-205ENST00000397101 NINJ2Q9NZG7 142 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 PKD2L2Q9NZM6 624 aa13.4□□□□□ -0.26
SEC13-205ENST00000397101 CSMD1Q96PZ7 3565 aa13.4□□□□□ -0.27
SEC13-205ENST00000397101 FAM237BA0A1B0GVD1 139 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 K7EM74 188 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 PYGLP06737 847 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 ZNF30P17039 623 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 SSTR1P30872 391 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 ETV3P41162 512 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 UQCRFS1P47985 274 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 HHEXQ03014 270 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 PTPRCAPQ14761 206 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 PYCR3Q53H96 274 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 ATP1A1-AS1Q5TC04 95 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 RAET1GQ6H3X3 334 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 ADAMTSL4Q6UY14 1074 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 UNC5AQ6ZN44 842 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 AGGF1Q8N302 714 aaeCLIP13.39□□□□□ -0.27
SEC13-205ENST00000397101 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.39□□□□□ -0.27
SEC13-205ENST00000397101 OR13C4Q8NGS5 318 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 OR6P1Q8NGX9 317 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 MFSD3Q96ES6 412 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 DNAJC1Q96KC8 554 aaKnown RBP13.39□□□□□ -0.27
SEC13-205ENST00000397101 MCCC1Q96RQ3 725 aaPredicted RBP13.39□□□□□ -0.27
SEC13-205ENST00000397101 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
SEC13-205ENST00000397101 ZMYND15Q9H091 742 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 STN1Q9H668 368 aaKnown RBP13.39□□□□□ -0.27
SEC13-205ENST00000397101 SUDS3Q9H7L9 328 aaPredicted RBP13.39□□□□□ -0.27
SEC13-205ENST00000397101 MRM3Q9HC36 420 aaKnown RBP13.39□□□□□ -0.27
SEC13-205ENST00000397101 KCND3Q9UK17 655 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 PCDHGA6Q9Y5G7 932 aa13.39□□□□□ -0.27
SEC13-205ENST00000397101 INPP4BO15327 924 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 LDB2O43679 373 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 SPAG6O75602 509 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 USP1O94782 785 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 GSTA2P09210 222 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 NR1D1P20393 614 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 GNLYP22749 145 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 F8A1P23610 371 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 HADHAP40939 763 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 POLD2P49005 469 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 MSLNQ13421 630 aaPredicted RBP13.38□□□□□ -0.27
SEC13-205ENST00000397101 THOC5Q13769 683 aaKnown RBP13.38□□□□□ -0.27
SEC13-205ENST00000397101 CRYMQ14894 314 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 ARMC3Q5W041 872 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 ALS2CLQ60I27 953 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 TECPR1Q7Z6L1 1165 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 RELL1Q8IUW5 271 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 RAVER1Q8IY67 606 aaKnown RBP13.38□□□□□ -0.27
SEC13-205ENST00000397101 TTC30BQ8N4P2 665 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 AVL9Q8NBF6 648 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 GABPB2Q8TAK5 448 aaPredicted RBP13.38□□□□□ -0.27
SEC13-205ENST00000397101 GSDMBQ8TAX9 411 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 CPT1CQ8TCG5 803 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 ZNF778Q96MU6 729 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 LYSMD1Q96S90 227 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 CCDC77Q9BR77 488 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.38□□□□□ -0.27
SEC13-205ENST00000397101 RAD18Q9NS91 495 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 C20orf96Q9NUD7 363 aaPredicted RBP13.38□□□□□ -0.27
SEC13-205ENST00000397101 SLC2A6Q9UGQ3 507 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 TLK1Q9UKI8 766 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 FAM169AQ9Y6X4 670 aa13.38□□□□□ -0.27
SEC13-205ENST00000397101 MN1Q10571 1320 aaPredicted RBP13.38□□□□□ -0.27
SEC13-205ENST00000397101 A0A087WUV0 522 aaPredicted RBP13.37□□□□□ -0.27
SEC13-205ENST00000397101 MROH6A6NGR9 719 aa13.37□□□□□ -0.27
SEC13-205ENST00000397101 TTLL8A6PVC2 850 aa13.37□□□□□ -0.27
SEC13-205ENST00000397101 A8MU76 341 aa13.37□□□□□ -0.27
SEC13-205ENST00000397101 CCL22O00626 93 aa13.37□□□□□ -0.27
SEC13-205ENST00000397101 TOX3O15405 576 aaPredicted RBP13.37□□□□□ -0.27
SEC13-205ENST00000397101 RIPK2O43353 540 aa13.37□□□□□ -0.27
SEC13-205ENST00000397101 VAPBO95292 243 aa13.37□□□□□ -0.27
SEC13-205ENST00000397101 SOD1P00441 154 aa13.37□□□□□ -0.27
SEC13-205ENST00000397101 SLC2A4P14672 509 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms