RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 GPR156Q8NFN8 814 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 OR9I1Q8NGQ6 314 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 SLC44A1Q8WWI5 657 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 Q96MT0 163 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 CDX2Q99626 313 aaPredicted RBP8.3□□□□□ -1.08
NDE1-202ENST00000396355 BARD1Q99728 777 aaKnown RBP8.3□□□□□ -1.08
NDE1-202ENST00000396355 CNPPD1Q9BV87 410 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 C1QTNF6Q9BXI9 259 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 SPATC1LQ9H0A9 340 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 XKR8Q9H6D3 395 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 DHX33Q9H6R0 707 aaKnown RBP8.3□□□□□ -1.08
NDE1-202ENST00000396355 TJP2Q9UDY2 1190 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 ADGRE2Q9UHX3 823 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 RIMS3Q9UJD0 308 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 CNTN6Q9UQ52 1028 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 AKT3Q9Y243 479 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 ANKRD6Q9Y2G4 727 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 A0A0G2JMZ2 1700 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 LRRC37A2A6NM11 1700 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 HMX3A6NHT5 357 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 TCEA3O75764 348 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 BCAS2O75934 225 aaPredicted RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 LCKP06239 509 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 VEPH1Q14D04 833 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 NPNTQ6UXI9 565 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 PHF13Q86YI8 300 aaPredicted RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 SLC34A3Q8N130 599 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 CACTIN-AS1Q8N1I8 211 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 NETO2Q8NC67 525 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 SRFBP1Q8NEF9 429 aaKnown RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 CEP76Q8TAP6 659 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 TADA1Q96BN2 335 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 KIF12Q96FN5 646 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 ITCHQ96J02 903 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 PIP5K1AQ99755 562 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 TRAF4Q9BUZ4 470 aaPredicted RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 SNX15Q9NRS6 342 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 NRBP2Q9NSY0 501 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 GPATCH2LQ9NWQ4 482 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 FAM118AQ9NWS6 357 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 ADAMTS5Q9UNA0 930 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 EIF3LQ9Y262 564 aaKnown RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 RPH3AQ9Y2J0 694 aaPredicted RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 PCDHB3Q9Y5E6 796 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 PSAT1Q9Y617 370 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 NFASCO94856 1347 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 PTPRFP10586 1907 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 TRAV6A0A075B6T7 132 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 FABP12A6NFH5 140 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 ATG12O94817 140 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 AP2A2O94973 939 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 NUDT7P0C024 238 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 TFEBP19484 476 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 PVALBP20472 110 aaPredicted RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 SPRP35270 261 aaPredicted RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 TGFBR1P36897 503 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 DCDC1P59894 354 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 GRIK4Q16099 956 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 SCIMPQ6UWF3 145 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 PID1Q7Z2X4 250 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 PIGZQ86VD9 579 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 UNC5BQ8IZJ1 945 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 OR10Q1Q8NGQ4 319 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 CNIH3Q8TBE1 160 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 FAM45AQ8TCE6 357 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 ZNF606Q8WXB4 792 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 ADAMTS14Q8WXS8 1223 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 PIGKQ92643 395 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 PABPC5Q96DU9 382 aaKnown RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 SLITRK1Q96PX8 696 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 SLC9A7Q96T83 725 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 PCYT2Q99447 389 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 C7orf50Q9BRJ6 194 aaKnown RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 CRISPLD1Q9H336 500 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 PNPLA8Q9NP80 782 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 KLHL8Q9P2G9 620 aaPredicted RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 RAB23Q9ULC3 237 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 MGAT4AQ9UM21 535 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 ERVH48-1M5A8F1 160 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 RGS10O43665 173 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 AP1G1O43747 822 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 SUPT20HL2P0C7V6 817 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 HLA-FP30511 346 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 STARP49675 285 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 STAT5BP51692 787 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 B2MP61769 119 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 NOMO1Q15155 1222 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 KLHL26Q53HC5 615 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 ARL13AQ5H913 290 aaPredicted RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 RELL1Q8IUW5 271 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 WDTC1Q8N5D0 677 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 RTL3Q8N8U3 475 aaKnown RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 OR13J1Q8NGT2 312 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 SLC2A14Q8TDB8 520 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 CCDC126Q96EE4 140 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 WDR83Q9BRX9 315 aaKnown RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 SLC25A23Q9BV35 468 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 COL25A1Q9BXS0 654 aaPredicted RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 SLC22A4Q9H015 551 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 QRSL1Q9H0R6 528 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms