RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 FGF22Q9HCT0 170 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 SLCO1B3Q9NPD5 702 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 KLC4Q9NSK0 619 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 FAM8A1Q9UBU6 413 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 INVSQ9Y283 1065 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 DOCK9Q9BZ29 2069 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 A8MT66 165 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 KLK8O60259 260 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 PSIP1O75475 530 aaKnown RBP13.39□□□□□ -0.27
VAPB-202ENST00000395802 RASGRP1O95267 797 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 TDGF1P13385 188 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 ACP5P13686 325 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 GNSP15586 552 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 IMPDH1P20839 514 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 DPP6P42658 865 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 PREPP48147 710 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 CLCNKAP51800 687 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 HERVK_113P63132 956 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 NFE2L1Q14494 772 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 PFKFB4Q16877 469 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 ZNF528Q3MIS6 628 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 SULT1C3Q6IMI6 304 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 CGB2Q6NT52 195 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 TSSK4Q6SA08 328 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 FAM47EQ6ZV65 393 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 FBXO15Q8NCQ5 510 aaPredicted RBP13.39□□□□□ -0.27
VAPB-202ENST00000395802 EXT2Q93063 718 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 GRAMD1AQ96CP6 724 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 CNDP1Q96KN2 507 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 SLC6A18Q96N87 628 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 EGFL8Q99944 293 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 ORAI3Q9BRQ5 295 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 ERVK-6Q9BXR3 956 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 MIR1-1HGQ9H1L0 117 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 GPR27Q9NS67 375 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 GULP1Q9UBP9 304 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 SUSD2Q9UGT4 822 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 CA5BQ9Y2D0 317 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 DNAJC16Q9Y2G8 782 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 PRKAB1Q9Y478 270 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 UBXN8O00124 270 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 KDM1AO60341 852 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 SNX3O60493 162 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 EDF1O60869 148 aaKnown RBP13.38□□□□□ -0.27
VAPB-202ENST00000395802 FGF3P11487 239 aaPredicted RBP13.38□□□□□ -0.27
VAPB-202ENST00000395802 HALP42357 657 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 AFF3P51826 1226 aaKnown RBP13.38□□□□□ -0.27
VAPB-202ENST00000395802 ILF3Q12906 894 aaKnown RBP eCLIP13.38□□□□□ -0.27
VAPB-202ENST00000395802 TEAD4Q15561 434 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 PPP1R3AQ16821 1122 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 PDZD3Q86UT5 571 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 VRK3Q8IV63 474 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 TMEFF1Q8IYR6 380 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 PTGR2Q8N8N7 351 aaPredicted RBP13.38□□□□□ -0.27
VAPB-202ENST00000395802 TMEM105Q8N8V8 129 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 PDPRQ8NCN5 879 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 PHC3Q8NDX5 983 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 PHF21BQ96EK2 531 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 L3HYPDHQ96EM0 354 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 SEC16BQ96JE7 1060 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 OSGEPL1Q9H4B0 414 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 MRPL40Q9NQ50 206 aaKnown RBP13.38□□□□□ -0.27
VAPB-202ENST00000395802 ARL15Q9NXU5 204 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 CACNA1IQ9P0X4 2223 aa13.38□□□□□ -0.27
VAPB-202ENST00000395802 TLR4O00206 839 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 BCAT2O15382 392 aaPredicted RBP13.37□□□□□ -0.27
VAPB-202ENST00000395802 NPHS1O60500 1241 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 MTHFD2P13995 350 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 KCNC1P48547 511 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 SLC1A6P48664 564 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 HK3P52790 923 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 NAGLUP54802 743 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 DMWDQ09019 674 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 GALNT1Q10472 559 aaPredicted RBP13.37□□□□□ -0.27
VAPB-202ENST00000395802 ABRQ12979 859 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 LYSMD4Q5XG99 296 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 RD3Q7Z3Z2 195 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 CRLF3Q8IUI8 442 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 HID1Q8IV36 788 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 RAB42Q8N4Z0 105 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 DEFB119Q8N690 84 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 PDXPQ96GD0 296 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 CCDC138Q96M89 665 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 C7orf26Q96N11 449 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 ELAC2Q9BQ52 826 aaKnown RBP13.37□□□□□ -0.27
VAPB-202ENST00000395802 GSDMCQ9BYG8 508 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 OR52A5Q9H2C5 316 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 UTP6Q9NYH9 597 aaKnown RBP13.37□□□□□ -0.27
VAPB-202ENST00000395802 TSR3Q9UJK0 312 aaKnown RBP13.37□□□□□ -0.27
VAPB-202ENST00000395802 HEBP2Q9Y5Z4 205 aa13.37□□□□□ -0.27
VAPB-202ENST00000395802 NCF1BA6NI72 391 aaPredicted RBP13.36□□□□□ -0.27
VAPB-202ENST00000395802 NCF1CA8MVU1 366 aaPredicted RBP13.36□□□□□ -0.27
VAPB-202ENST00000395802 CTSEP14091 401 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 NCF1P14598 390 aaPredicted RBP13.36□□□□□ -0.27
VAPB-202ENST00000395802 BCKDHBP21953 392 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 PDHA2P29803 388 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 PIK3CGP48736 1102 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 NUBP1P53384 320 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 C21orf59P57076 290 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms