RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 HDDC3Q8N4P3 179 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 LINC00615Q96LM1 132 aaPredicted RBP11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 C8orf33Q9H7E9 229 aaPredicted RBP11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 POLG2Q9UHN1 485 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 TIMM22Q9Y584 194 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 PTGDR2Q9Y5Y4 395 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 ATG2BQ96BY7 2078 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 PABPN1LA6NDY0 278 aaKnown RBP11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 A8MUI8 341 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 MEI4A8MW99 385 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 H3BQ06 376 aaPredicted RBP11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 VEGFDO43915 354 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 PSIP1O75475 530 aaKnown RBP11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 STK16O75716 305 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 WFS1O76024 890 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 ATP6V1G2O95670 118 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 EGFP01133 1207 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 PRR35P0CG20 571 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 DRD1P21728 446 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 PGM1P36871 562 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 CCNG1P51959 295 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 GTF2H3Q13889 308 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 PTK2BQ14289 1009 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 STARD3Q14849 445 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 KIAA1211LQ6NV74 962 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 MBOAT1Q6ZNC8 495 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 TRIM74Q86UV6 250 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 PACS2Q86VP3 889 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 SNX32Q86XE0 403 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 CACUL1Q86Y37 369 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 SLC22A15Q8IZD6 547 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 IL17RCQ8NAC3 791 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 OR4F6Q8NGB9 312 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 MCOLN3Q8TDD5 553 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 DNASE1L2Q92874 299 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 COX14Q96I36 57 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 HIC2Q96JB3 615 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 NTMT1Q9BV86 223 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 OR2AG1Q9H205 316 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 SERGEFQ9UGK8 458 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 GPR34Q9UPC5 381 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 BTRCQ9Y297 605 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 ANGPTL3Q9Y5C1 460 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 PIAS3Q9Y6X2 628 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 A0A1W2PP55 124 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 IGLON5A6NGN9 336 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 ADAM23O75077 832 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 LINC00032P0C843 101 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 EPB42P16452 691 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 LBPP18428 481 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 GDF5P43026 501 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 RAP1GDS1P52306 607 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 PON2Q15165 354 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 OGFOD2Q6N063 350 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 PNCKQ6P2M8 343 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 LRRC70Q7Z2Q7 622 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 TRMT11Q7Z4G4 463 aaKnown RBP11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 CDYL2Q8N8U2 506 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 ATP6V1E2Q96A05 226 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 TUBGCP3Q96CW5 907 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 CDK15Q96Q40 435 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 SLC32A1Q9H598 525 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 ATXN10Q9UBB4 475 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 GULP1Q9UBP9 304 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 C17orf113A0A1B0GUU1 675 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 LIN7AO14910 233 aaPredicted RBP11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 KATNA1O75449 491 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 PCDH8O95206 1070 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 CAPN1P07384 714 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 ALDOCP09972 364 aaKnown RBP11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 CD1EP15812 388 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 TEAD1P28347 426 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 SLC6A12P48065 614 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 ACADVLP49748 655 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 CCR3P51677 355 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 SLC25A3Q00325 362 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 CUL3Q13618 768 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 MAPRE2Q15555 327 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 WASHC2DQ5SRD0 308 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 RNF165Q6ZSG1 346 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 MILR1Q7Z6M3 343 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 SLC44A3Q8N4M1 653 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 PLA2G15Q8NCC3 412 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 HMGCLL1Q8TB92 370 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 METTL6Q8TCB7 284 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 MKRN2Q9H000 416 aaKnown RBP11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 KCNK12Q9HB15 430 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 HEBP1Q9NRV9 189 aa11.19□□□□□ -0.62
SMARCAL1-203ENST00000392128 A0A1W2PPC1 479 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 A0A1W2PQF6 199 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 PSMD12O00232 456 aaPredicted RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 RNASEH2AO75792 299 aaKnown RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 KLF8O95600 359 aaPredicted RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 EBLN1P0CF75 366 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 C7P10643 843 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 HGFP14210 728 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 HOXB2P14652 356 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 ITGAXP20702 1163 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 HNRNPH1P31943 449 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms