RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 CTXN3Q4LDR2 81 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 SPECC1Q5M775 1068 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 FAM83BQ5T0W9 1011 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 SULT6B1Q6IMI4 303 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 PAMR1Q6UXH9 720 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 MYO1HQ8N1T3 1032 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 EMC1Q8N766 993 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 PLD5Q8N7P1 536 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 RNF138Q8WVD3 245 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 IGSF8Q969P0 613 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 SDCCAG3Q96C92 435 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 NTNG2Q96CW9 530 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 C10orf90Q96M02 699 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 SMC6Q96SB8 1091 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 SEMA3CQ99985 751 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 TMEM47Q9BQJ4 181 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 PANK2Q9BZ23 570 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 GLIS2Q9BZE0 524 aaPredicted RBP0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 MROH8Q9H579 483 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 TAF1DQ9H5J8 278 aaPredicted RBP0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 MAGIXQ9H6Y5 334 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 JPT2Q9H910 190 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 C20orf141Q9NUB4 165 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 HSPB7Q9UBY9 170 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 STK39Q9UEW8 545 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 OR14J1Q9UGF5 321 aa0.29□□□□□ -2.36
MIR548A3-201ENST00000385297 MDN1Q9NU22 5596 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 PINLYPA6NC86 204 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 EIF4E1BA6NMX2 242 aaKnown RBP0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 K7ENM7 598 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 ANP32CO43423 234 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 TSPAN6O43657 245 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 CEACAM4O75871 244 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 SEC24AO95486 1093 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 RENP00797 406 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 H1F0P07305 194 aaKnown RBP0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 SUPT20HL2P0C7V6 817 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 FAM200BP0CF97 657 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 RPS2P15880 293 aaKnown RBP0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 ABCB4P21439 1286 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 GIFP27352 417 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 B3GALT5-AS1P59052 145 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 KHDRBS1Q07666 443 aaKnown RBP eCLIP0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 GALNT1Q10472 559 aaPredicted RBP0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 UBE4AQ14139 1066 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 STARD3Q14849 445 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 PFKFB4Q16877 469 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 KRTAP13-4Q3LI77 160 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 CES4AQ5XG92 561 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 ASPHD2Q6ICH7 369 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 IRGCQ6NXR0 463 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 KLC3Q6P597 504 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 G2E3Q7L622 706 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 ABI3BPQ7Z7G0 1075 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 OR1J2Q8NGS2 313 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 LINC01006Q8NI28 216 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 GCC1Q96CN9 775 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 PABPC5Q96DU9 382 aaKnown RBP0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 SGK494Q96LW2 274 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 CFAP57Q96MR6 1250 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 EYA3Q99504 573 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 APOL2Q9BQE5 337 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 CHODLQ9H9P2 273 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 B3GAT2Q9NPZ5 323 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 SDR39U1Q9NRG7 319 aaPredicted RBP0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 RCC2Q9P258 522 aaKnown RBP0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 UBA2Q9UBT2 640 aaPredicted RBP0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 Q9UF83 564 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 RAB26Q9ULW5 256 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 NOP58Q9Y2X3 529 aaKnown RBP0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 DERAQ9Y315 318 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 SCINQ9Y6U3 715 aa0.28□□□□□ -2.36
MIR548A3-201ENST00000385297 ARHGEF40Q8TER5 1519 aa0.28□□□□□ -2.37
MIR548A3-201ENST00000385297 CDC42BPBQ9Y5S2 1711 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 OGTO15294 1046 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 TACC1O75410 805 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 NR2C1P13056 603 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 HRH2P25021 359 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 PDHA2P29803 388 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 TECP42680 631 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 WNT4P56705 351 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 EFNB1P98172 346 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 PDE1CQ14123 709 aaPredicted RBP0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 EFTUD2Q15029 972 aaKnown RBP eCLIP0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 PTPROQ16827 1216 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 ZNF658BQ4V348 819 aaPredicted RBP0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 FAM109BQ6ICB4 259 aaPredicted RBP0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 TMEM81Q6P7N7 255 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 NOTUMQ6P988 496 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 TMEM139Q8IV31 216 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 OR4N5Q8IXE1 308 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 USP38Q8NB14 1042 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 FLVCR1-AS1Q8TAF5 88 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 TTC8Q8TAM2 541 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 NSMAFQ92636 917 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 H2AFJQ9BTM1 129 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 MBNL1Q9NR56 388 aaKnown RBP0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 ALKBH4Q9NXW9 302 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 A4GNTQ9UNA3 340 aa0.27□□□□□ -2.37
MIR548A3-201ENST00000385297 PPP2R2CQ9Y2T4 447 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms