RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ERAL1O75616 437 aaKnown RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 RFPL1O75677 317 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 NPPAP01160 153 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 RPLP0P05388 317 aaKnown RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 C8GP07360 202 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 COL6A1P12109 1028 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 ELNP15502 786 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 AQP1P29972 269 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 TGFBR2P37173 567 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 NRLP54845 237 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 SP2Q02086 613 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 BIKQ13323 160 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 TUBA3CQ13748 450 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 TARBP2Q15633 366 aaKnown RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 PITRM1Q5JRX3 1037 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 LDLRAP1Q5SW96 308 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 ZNF697Q5TEC3 545 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 FAM220AQ7Z4H9 259 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 LIX1Q8N485 282 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 BEND7Q8N7W2 519 aaPredicted RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 ATAD1Q8NBU5 361 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 SMG8Q8ND04 991 aaKnown RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 PSMG2Q969U7 264 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 ZUFSPQ96AP4 578 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 C8orf48Q96LL4 319 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 AIF1LQ9BQI0 150 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 ZNF395Q9H8N7 513 aaPredicted RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 AKTIPQ9H8T0 292 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 ZSCAN32Q9NX65 697 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 TRIM17Q9Y577 477 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 GPC6Q9Y625 555 aaPredicted RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 RANBP2P49792 3224 aaKnown RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 FAM86C2PA6NEL3 165 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 MAGEB17A8MXT2 336 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 TREHO43280 583 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 ATG13O75143 517 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 SLC35G4P0C7Q5 338 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 ACADMP11310 421 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 ITPKAP23677 461 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 OR1D2P34982 312 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 CLCNKBP51801 687 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 IL18R1Q13478 541 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 LAPTM5Q13571 262 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 PCLAFQ15004 111 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 MPPE1Q53F39 396 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 IFI44LQ53G44 452 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 RAVER1Q8IY67 606 aaKnown RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 SRFBP1Q8NEF9 429 aaKnown RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 COL26A1Q96A83 441 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 TAMM41Q96BW9 452 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 DIRAS2Q96HU8 199 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 CGREF1Q99674 301 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 CHCHD6Q9BRQ6 235 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 COMMD9Q9P000 198 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 ZDHHC2Q9UIJ5 367 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 PHF11Q9UIL8 331 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 MAN2B2Q9Y2E5 1009 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 IRAK3Q9Y616 596 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 THSD7BQ9C0I4 1608 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 H3BM21 787 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 K7EPI3 171 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 CCL22O00626 93 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 PQBP1O60828 265 aaKnown RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 LGR5O75473 907 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 ECDO95905 644 aaPredicted RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 IFNGP01579 166 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 AHSGP02765 367 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 CORO1AP31146 461 aaKnown RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 GMFBP60983 142 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 C2orf80Q0P641 193 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 ZNF829Q3KNS6 432 aaPredicted RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 DCST1Q5T197 706 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 CDCA2Q69YH5 1023 aaPredicted RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 LAPTM4BQ86VI4 370 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 DCBLD1Q8N8Z6 715 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 GRPEL2Q8TAA5 225 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 ZNF420Q8TAQ5 688 aaPredicted RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 CLEC4CQ8WTT0 213 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 SLC7A6OSQ96CW6 309 aaPredicted RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 TXLNGYQ9BZA5 131 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 PADI3Q9ULW8 664 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 PCDHGB3Q9Y5G1 929 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 DNAJC25-GNG10A0A024R161 153 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 A0A1W2PP18 115 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 BHMG1C9JSJ3 638 aaPredicted RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 H3BSA7 217 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 PLOD3O60568 738 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 HIST1H2ABP04908 130 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 ELFN1P0C7U0 828 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 PABPC4LP0CB38 370 aaKnown RBP8.26□□□□□ -1.09
VPS36-201ENST00000378060 NSG1P42857 185 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 GSK3BP49841 420 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 ATP4BP51164 291 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 BCAP31P51572 246 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 GAD2Q05329 585 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 CHIT1Q13231 466 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 NAE1Q13564 534 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 GRB14Q14449 540 aa8.26□□□□□ -1.09
VPS36-201ENST00000378060 SFT2D3Q587I9 215 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms