RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 OR4E2Q8NGC2 313 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 GRK7Q8WTQ7 553 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 TTC9Q92623 222 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 TFGQ92734 400 aaPredicted RBP16.37■□□□□ 0.21
HMGN4-201ENST00000377575 OSBPL9Q96SU4 736 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 MAP3K3Q99759 626 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 HGH1Q9BTY7 390 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 EFHD1Q9BUP0 239 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 PDE7BQ9NP56 450 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 TREX1Q9NSU2 369 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 SYBUQ9NX95 663 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 CES2O00748 559 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 CD3EAPO15446 510 aaKnown RBP16.36■□□□□ 0.21
HMGN4-201ENST00000377575 ZBTB11O95625 1053 aaPredicted RBP16.36■□□□□ 0.21
HMGN4-201ENST00000377575 FGF5P12034 268 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 LIFP15018 202 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 POLR2CP19387 275 aaPredicted RBP16.36■□□□□ 0.21
HMGN4-201ENST00000377575 MGAT1P26572 445 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 COILP38432 576 aaPredicted RBP16.36■□□□□ 0.21
HMGN4-201ENST00000377575 MAGEA6P43360 314 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 HSD11B2P80365 405 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 ACY1Q03154 408 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 ABHD18Q0P651 414 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 BRD3Q15059 726 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.36■□□□□ 0.21
HMGN4-201ENST00000377575 TTC27Q6P3X3 843 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 CCDC137Q6PK04 289 aaKnown RBP16.36■□□□□ 0.21
HMGN4-201ENST00000377575 OTUD6BQ8N6M0 293 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 OR52E1Q8NGJ3 308 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 ACTRT1Q8TDG2 376 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 KIFC1Q9BW19 673 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 SPRY4Q9C004 299 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 TFB2MQ9H5Q4 396 aaKnown RBP16.36■□□□□ 0.21
HMGN4-201ENST00000377575 GPN2Q9H9Y4 310 aaPredicted RBP16.36■□□□□ 0.21
HMGN4-201ENST00000377575 TRMT1Q9NXH9 659 aaKnown RBP16.36■□□□□ 0.21
HMGN4-201ENST00000377575 POMT2Q9UKY4 750 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 RARRES3Q9UL19 164 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 SOX13Q9UN79 622 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 ASF1AQ9Y294 204 aa16.36■□□□□ 0.21
HMGN4-201ENST00000377575 SLC5A10A0PJK1 596 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 GSAPA4D1B5 854 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 PRMT5O14744 637 aaPredicted RBP16.35■□□□□ 0.21
HMGN4-201ENST00000377575 KDM1AO60341 852 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 PHF2O75151 1096 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 ITGB2P05107 769 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 NMBRP28336 390 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 ARCN1P48444 511 aaKnown RBP16.35■□□□□ 0.21
HMGN4-201ENST00000377575 FNTAP49354 379 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 KPNA2P52292 529 aaKnown RBP16.35■□□□□ 0.21
HMGN4-201ENST00000377575 TERF1P54274 439 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 SEMA3AQ14563 771 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 TMTC4Q5T4D3 741 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 PCSK4Q6UW60 755 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 BPHLQ86WA6 291 aaPredicted RBP16.35■□□□□ 0.21
HMGN4-201ENST00000377575 TBC1D21Q8IYX1 336 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 COG1Q8WTW3 980 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 STAMBPL1Q96FJ0 436 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 ELMO2Q96JJ3 720 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 SOHLH2Q9NX45 425 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 POLG2Q9UHN1 485 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 GNPTGQ9UJJ9 305 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 SNX12Q9UMY4 172 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 KALRNO60229 2985 aa16.35■□□□□ 0.21
HMGN4-201ENST00000377575 TCRBV7S3A2A0A539 114 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 ZNF891A8MT65 544 aaPredicted RBP16.34■□□□□ 0.21
HMGN4-201ENST00000377575 PFDN6O15212 129 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 KIAA0754O94854 1291 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 EBLN1P0CF75 366 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 PAMP19021 973 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 WT1P19544 449 aaPredicted RBP16.34■□□□□ 0.21
HMGN4-201ENST00000377575 CDH3P22223 829 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 SHMT2P34897 504 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 STAT5AP42229 794 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 TMED2Q15363 201 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 RNF187Q5TA31 235 aaPredicted RBP16.34■□□□□ 0.21
HMGN4-201ENST00000377575 MRNIPQ6NTE8 343 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 CASC4Q6P4E1 433 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 C6orf15Q6UXA7 325 aaPredicted RBP16.34■□□□□ 0.21
HMGN4-201ENST00000377575 TIPARPQ7Z3E1 657 aaKnown RBP16.34■□□□□ 0.21
HMGN4-201ENST00000377575 AMIGO1Q86WK6 493 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 LRRC6Q86X45 466 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 D2HGDHQ8N465 521 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 PHC3Q8NDX5 983 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 OR5AR1Q8NGP9 310 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 OR5K2Q8NHB8 316 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 ASZ1Q8WWH4 475 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 MFSD3Q96ES6 412 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 FCRL4Q96PJ5 515 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 PANX3Q96QZ0 392 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 CARD6Q9BX69 1037 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 FANCEQ9HB96 536 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 XAB2Q9HCS7 855 aaKnown RBP16.34■□□□□ 0.21
HMGN4-201ENST00000377575 C1GALT1Q9NS00 363 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 SAMD15Q9P1V8 674 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 MARCH4Q9P2E8 410 aaPredicted RBP16.34■□□□□ 0.21
HMGN4-201ENST00000377575 LNPEPQ9UIQ6 1025 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 BTRCQ9Y297 605 aa16.34■□□□□ 0.21
HMGN4-201ENST00000377575 C2orf74A8MZ97 194 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 BTN3A1O00481 513 aa16.33■□□□□ 0.2
HMGN4-201ENST00000377575 MAP3K7O43318 606 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms