RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 RUNDC3AQ59EK9 446 aa14.12□□□□□ -0.15
TRAF1-201ENST00000373887 CHRDL2Q6WN34 429 aa14.12□□□□□ -0.15
TRAF1-201ENST00000373887 DNAJB7Q7Z6W7 309 aaPredicted RBP14.12□□□□□ -0.15
TRAF1-201ENST00000373887 PQLC1Q8N2U9 271 aa14.12□□□□□ -0.15
TRAF1-201ENST00000373887 COQ8BQ96D53 544 aa14.12□□□□□ -0.15
TRAF1-201ENST00000373887 S100A14Q9HCY8 104 aa14.12□□□□□ -0.15
TRAF1-201ENST00000373887 IRS2Q9Y4H2 1338 aa14.12□□□□□ -0.15
TRAF1-201ENST00000373887 SMAD9O15198 467 aaKnown RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 HSPB3Q12988 150 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 VPS26BQ4G0F5 336 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 CRYBG2Q8N1P7 616 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 HEPHQ9BQS7 1158 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 FBXW2Q9UKT8 454 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 VWA7Q9Y334 891 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 PARP4Q9UKK3 1724 aaKnown RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 TCRBV9S1A1TA0A576 114 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 CPED1A4D0V7 1026 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 hCG_2039718K7EN88 272 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 ITGB1P05556 798 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 LAMP2P13473 410 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 RHOQP17081 205 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 TEX44Q53QW1 395 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 DCST1Q5T197 706 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 RNASEH2BQ5TBB1 312 aaKnown RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 SH3PXD2AQ5TCZ1 1133 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 NAPRTQ6XQN6 538 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 KCTD8Q6ZWB6 473 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 CTU1Q7Z7A3 348 aaKnown RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 FAM110BQ8TC76 370 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 CLP1Q92989 425 aaKnown RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 NXNL1Q96CM4 212 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 ZNF570Q96NI8 536 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 AIF1LQ9BQI0 150 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 APOBEC3GQ9HC16 384 aaKnown RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 HPF1Q9NWY4 346 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 SMCO3A2RU48 225 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 C5orf51A6NDU8 294 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 OR1I1O60431 355 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 EFNA1P20827 205 aaPredicted RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 DEFA5Q01523 94 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 SPATA19Q7Z5L4 167 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 GRASPQ7Z6J2 395 aaPredicted RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 RBM4BQ9BQ04 359 aaKnown RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 RBM4Q9BWF3 364 aaKnown RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 ERVW-1Q9UQF0 538 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 YJEFN3A6XGL0 299 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 CES1P23141 567 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 PSMA1P25786 263 aaKnown RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 CCR3P51677 355 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 RGS8P57771 180 aaPredicted RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 NAA20P61599 178 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 TOR1AIP1Q5JTV8 583 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 TXNDC8Q6A555 127 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 REP15Q6BDI9 236 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 CLEC6AQ6EIG7 209 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 THAP5Q7Z6K1 395 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 CPSF7Q8N684 471 aaKnown RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 TBX5Q99593 518 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 PCYOX1Q9UHG3 505 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 PEAK1Q9H792 1746 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 A0A1B0GVM2 712 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 TCAF2A6NFQ2 919 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 ANXA2P2A6NMY6 339 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 SCGB1D2O95969 90 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 ANXA2P07355 339 aaKnown RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 S100A2P29034 98 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 PTPN9P43378 593 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 MPP1Q00013 466 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 OGFRL1Q5TC84 451 aaPredicted RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 ALG1LQ6GMV1 187 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 MMAAQ8IVH4 418 aaKnown RBP14.11□□□□□ -0.15
TRAF1-201ENST00000373887 OR10H4Q8NGA5 316 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 ZNF384Q8TF68 577 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 MGME1Q9BQP7 344 aa14.11□□□□□ -0.15
TRAF1-201ENST00000373887 FADS2P1A8MWK0 482 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 PPP1R15BQ5SWA1 713 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 ZNF627Q7L945 461 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 TMC8Q8IU68 726 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 ARHGAP39Q9C0H5 1083 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 ZNF639Q9UID6 485 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 DHX15O43143 795 aaKnown RBP14.1□□□□□ -0.15
TRAF1-201ENST00000373887 HCRTO43612 131 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 AHCYP23526 432 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 AP3S2P59780 193 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 XIAPP98170 497 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 QPCTQ16769 361 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 PLEKHG4Q58EX7 1191 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 HECTD2Q5U5R9 776 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 ANKFN1Q8N957 763 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 ACMSDQ8TDX5 336 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 SGCDQ92629 289 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 SPATA9Q9BWV2 254 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 COMMD4Q9H0A8 199 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 OR51V1Q9H2C8 321 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 CCSER2Q9H7U1 834 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 TESMINQ9Y4I5 508 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 PCDHGB3Q9Y5G1 929 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 A0A1W2PQ67 120 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 ILF3Q12906 894 aaKnown RBP eCLIP14.1□□□□□ -0.15
TRAF1-201ENST00000373887 NAE1Q13564 534 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms