RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 PENKP01210 267 aaPredicted RBP17.13■□□□□ 0.33
PTPRU-202ENST00000373779 CDH12P55289 794 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 NFKB2Q00653 900 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 NAE1Q13564 534 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 GPAT3Q53EU6 434 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 TEX47Q8TBZ9 253 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 POPDC3Q9HBV1 291 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 RPLP0P05388 317 aaKnown RBP17.13■□□□□ 0.33
PTPRU-202ENST00000373779 ZNF510Q9Y2H8 683 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 LOC100130705A0A1B0GUX0 176 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 AREL1O15033 823 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 PER2O15055 1255 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 ABCB7O75027 752 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 IL7RP16871 459 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 S100A1P23297 94 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 PPP4R4Q6NUP7 873 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 BHLHB9Q6PI77 547 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 FADS2P1A8MWK0 482 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 PGLSO95336 258 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 EDN1P05305 212 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 C8BP07358 591 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 C8GP07360 202 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 G6PDP11413 515 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 CD36P16671 472 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 TUBA3CQ13748 450 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 USP39Q53GS9 565 aaKnown RBP17.12■□□□□ 0.33
PTPRU-202ENST00000373779 AURKBQ96GD4 344 aaPredicted RBP17.12■□□□□ 0.33
PTPRU-202ENST00000373779 SUSD3Q96L08 255 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 TNKS2Q9H2K2 1166 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 PTGFRNQ9P2B2 879 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 ZCWPW2A0A1B0GU75 182 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.12■□□□□ 0.33
PTPRU-202ENST00000373779 STX16O14662 325 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 HAT1O14929 419 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 STX11O75558 287 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 PRKAR2AP13861 404 aaKnown RBP17.12■□□□□ 0.33
PTPRU-202ENST00000373779 MANFP55145 182 aaKnown RBP17.12■□□□□ 0.33
PTPRU-202ENST00000373779 INHBEP58166 350 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 ATP6AP1Q15904 470 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 ATXN7L2Q5T6C5 722 aaPredicted RBP17.12■□□□□ 0.33
PTPRU-202ENST00000373779 USP43Q70EL4 1123 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 TSPEARQ8WU66 669 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 EEF1AKMT1Q8WVE0 214 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 RPF2Q9H7B2 306 aaKnown RBP17.12■□□□□ 0.33
PTPRU-202ENST00000373779 VPS51Q9UID3 782 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 KLHL33A6NCF5 533 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 SLC38A8A6NNN8 435 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 UGT2B17O75795 530 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 CLPXO76031 633 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 RASAL1O95294 804 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 UGT2B4P06133 528 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 DPY19L1Q2PZI1 675 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 OR4F6Q8NGB9 312 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 MRGPRX2Q96LB1 330 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 TPK1Q9H3S4 243 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 MAP4K5Q9Y4K4 846 aa17.12■□□□□ 0.33
PTPRU-202ENST00000373779 MPZL2O60487 215 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 STBD1O95210 358 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 DIO3P55073 304 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 LAPTM5Q13571 262 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 ANGPT1Q15389 498 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 TEAD4Q15561 434 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 ZFP69Q49AA0 526 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 GPR153Q6NV75 609 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 FUT10Q6P4F1 479 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 HACD2Q6Y1H2 254 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 SNX20Q7Z614 316 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 RAB43Q86YS6 212 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 TP53INP2Q8IXH6 220 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 ZNF778Q96MU6 729 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 CYP2S1Q96SQ9 504 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 TOR3AQ9H497 397 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 TRIM39Q9HCM9 518 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 ZDHHC7Q9NXF8 308 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 ASGR1P07306 291 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 PRKAR1AP10644 381 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 PSMA1P25786 263 aaKnown RBP17.11■□□□□ 0.33
PTPRU-202ENST00000373779 NSG1P42857 185 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 TPTEP56180 551 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 SCAPQ12770 1279 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 RAB39AQ14964 217 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 FAM92BQ6ZTR7 304 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 DSG4Q86SJ6 1040 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 ANKFN1Q8N957 763 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 SMYD1Q8NB12 490 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.333e-9■■■■■ 44.8
PTPRU-202ENST00000373779 C8orf48Q96LL4 319 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 HMX1Q9NP08 348 aaPredicted RBP17.11■□□□□ 0.33
PTPRU-202ENST00000373779 TBCCD1Q9NVR7 557 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 MTRRQ9UBK8 725 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 IFNW1P05000 195 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 ARSFP54793 590 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 CCDC149Q6ZUS6 474 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 GOLGA7Q7Z5G4 137 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 VANGL1Q8TAA9 524 aaPredicted RBP17.11■□□□□ 0.33
PTPRU-202ENST00000373779 TMEM248Q9NWD8 314 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 CFAP97Q9P2B7 532 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 GULP1Q9UBP9 304 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 TMA7Q9Y2S6 64 aaKnown RBP17.11■□□□□ 0.33
PTPRU-202ENST00000373779 GMEB1Q9Y692 573 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms