RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 BRSK1Q8TDC3 778 aa20.14■□□□□ 0.81
SYNC-201ENST00000373484 PYDC1Q8WXC3 89 aa20.14■□□□□ 0.81
SYNC-201ENST00000373484 ELF4Q99607 663 aaPredicted RBP20.14■□□□□ 0.81
SYNC-201ENST00000373484 CPNE1Q99829 537 aa20.14■□□□□ 0.81
SYNC-201ENST00000373484 ADAMTS6Q9UKP5 1117 aa20.14■□□□□ 0.81
SYNC-201ENST00000373484 BPTFQ12830 3046 aa20.14■□□□□ 0.81
SYNC-201ENST00000373484 TPP1O14773 563 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 DFNA5O60443 496 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 SOD1P00441 154 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 ITGA2BP08514 1039 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 GP5P40197 560 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 THOP1P52888 689 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 DCDC1P59894 354 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 LAMB3Q13751 1172 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 PTK2BQ14289 1009 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 FZD2Q14332 565 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 PDK3Q15120 406 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 TAF1AQ15573 450 aaPredicted RBP20.13■□□□□ 0.81
SYNC-201ENST00000373484 STPG1Q5TH74 334 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 RAET1GQ6H3X3 334 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 EPGNQ6UW88 154 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 UGT2A3Q6UWM9 527 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 MPP5Q8N3R9 675 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 OXR1Q8N573 874 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 FUBP1Q96AE4 644 aaKnown RBP20.13■□□□□ 0.81
SYNC-201ENST00000373484 DGCR14Q96DF8 476 aaKnown RBP20.13■□□□□ 0.81
SYNC-201ENST00000373484 RIOK2Q9BVS4 552 aaKnown RBP20.13■□□□□ 0.81
SYNC-201ENST00000373484 CDH19Q9H159 772 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 FAM83DQ9H4H8 585 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 WDR26Q9H7D7 661 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 RAD18Q9NS91 495 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 IL17CQ9P0M4 197 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 RAB26Q9ULW5 256 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 FNDC3AQ9Y2H6 1198 aaKnown RBP20.13■□□□□ 0.81
SYNC-201ENST00000373484 PLXNB3Q9ULL4 1909 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 C4orf47A7E2U8 309 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 PYGLP06737 847 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 HOXC4P09017 264 aaPredicted RBP20.13■□□□□ 0.81
SYNC-201ENST00000373484 ZNF883P0CG24 379 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 COX4I1P13073 169 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 BPIP17213 487 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 GPR1P46091 355 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 HSPA13P48723 471 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 CDH17Q12864 832 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 NFATC4Q14934 902 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 SPANXN3Q5MJ09 141 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 PRAMEF14Q5SWL7 426 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 MACC1Q6ZN28 852 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 GPR26Q8NDV2 337 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 OR52K1Q8NGK4 314 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 NETO1Q8TDF5 533 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 AGAP2Q99490 1192 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 NDNQ99608 321 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 TEX101Q9BY14 249 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 PTTG2Q9NZH5 202 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 ARL5AQ9Y689 179 aa20.13■□□□□ 0.81
SYNC-201ENST00000373484 A0A1B0GTQ1 180 aa20.12■□□□□ 0.81
SYNC-201ENST00000373484 H3BNX3 289 aa20.12■□□□□ 0.81
SYNC-201ENST00000373484 THRAP10827 490 aa20.12■□□□□ 0.81
SYNC-201ENST00000373484 CPA3P15088 417 aa20.12■□□□□ 0.81
SYNC-201ENST00000373484 GRIA1P42261 906 aa20.12■□□□□ 0.81
SYNC-201ENST00000373484 RXRGP48443 463 aa20.12■□□□□ 0.81
SYNC-201ENST00000373484 KIAA1024LP59773 190 aa20.12■□□□□ 0.81
SYNC-201ENST00000373484 TBL3Q12788 808 aaKnown RBP20.12■□□□□ 0.81
SYNC-201ENST00000373484 C16orf89Q6UX73 402 aa20.12■□□□□ 0.81
SYNC-201ENST00000373484 LCA5Q86VQ0 697 aa20.12■□□□□ 0.81
SYNC-201ENST00000373484 PARGQ86W56 976 aa20.12■□□□□ 0.81
SYNC-201ENST00000373484 HEATR4Q86WZ0 1026 aa20.12■□□□□ 0.81
SYNC-201ENST00000373484 C10orf107Q8IVU9 208 aa20.12■□□□□ 0.81
SYNC-201ENST00000373484 BPIFA1Q9NP55 256 aa20.12■□□□□ 0.81
SYNC-201ENST00000373484 CASS4Q9NQ75 786 aa20.12■□□□□ 0.81
SYNC-201ENST00000373484 PIH1D1Q9NWS0 290 aaKnown RBP20.12■□□□□ 0.81
SYNC-201ENST00000373484 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.12■□□□□ 0.81
SYNC-201ENST00000373484 CEP250Q9BV73 2442 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 C2orf81A6NN90 581 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 LYPLA1O75608 230 aaPredicted RBP20.11■□□□□ 0.81
SYNC-201ENST00000373484 CRTAMO95727 393 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 CAPNS1P04632 268 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 MPOP05164 745 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 APOA4P06727 396 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 TPH1P17752 444 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 LPOP22079 712 aaPredicted RBP20.11■□□□□ 0.81
SYNC-201ENST00000373484 RPL5P46777 297 aaKnown RBP20.11■□□□□ 0.81
SYNC-201ENST00000373484 CDK3Q00526 305 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 TRIP10Q15642 601 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 ADAMTSL4Q6UY14 1074 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 DEFB107AQ8IZN7 70 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 PQLC1Q8N2U9 271 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 DNAAF3Q8N9W5 541 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 PLEKHG4BQ96PX9 1271 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 LGR4Q9BXB1 951 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 PHPT1Q9NRX4 125 aaPredicted RBP20.11■□□□□ 0.81
SYNC-201ENST00000373484 TM7SF3Q9NS93 570 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 TXNDC16Q9P2K2 825 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 ATXN10Q9UBB4 475 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 PADI4Q9UM07 663 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 PKP3Q9Y446 797 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 CACNB4O00305 520 aaPredicted RBP20.11■□□□□ 0.81
SYNC-201ENST00000373484 POLBP06746 335 aa20.11■□□□□ 0.81
SYNC-201ENST00000373484 MYCLP1P12525 358 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms