RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 ALDOAP04075 364 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 FGF3P11487 239 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 ANPEPP15144 967 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 GM2AP17900 193 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 CCNCP24863 283 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 PCSK1P29120 753 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 HOXD12P35452 270 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 IGFALSP35858 605 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 MLH1P40692 756 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 HSPA13P48723 471 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 NUMBP49757 651 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 RGS7P49802 495 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 SULT1E1P49888 294 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 SRSF3P84103 164 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 MXRA7P84157 204 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 TLE1Q04724 770 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 GALNT2Q10471 571 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 CDH17Q12864 832 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 SF3A3Q12874 501 aaKnown RBP eCLIP6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 SLC10A2Q12908 348 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 PRKAA1Q13131 559 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 LAMB3Q13751 1172 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 PDE1CQ14123 709 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 CA9Q16790 459 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 RAB41Q5JT25 222 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 CFAP157Q5JU67 520 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 RABGAP1LQ5R372 815 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 TEDDM1Q5T9Z0 273 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 C1orf146Q5VVC0 180 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 IRAK1BP1Q5VVH5 260 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 LYSMD4Q5XG99 296 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 TRIM68Q6AZZ1 485 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 TIGD7Q6NT04 549 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 CASC4Q6P4E1 433 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 PGM2L1Q6PCE3 622 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 EPGNQ6UW88 154 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 DSTYKQ6XUX3 929 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 ATG14Q6ZNE5 492 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 RINLQ6ZS11 566 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 KIAA0408Q6ZU52 694 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 RFX8Q6ZV50 586 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 PID1Q7Z2X4 250 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 GALNT7Q86SF2 657 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 CLEC14AQ86T13 490 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 PIGZQ86VD9 579 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 C11orf74Q86VG3 221 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 SFTPA1Q8IWL2 248 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 ULK2Q8IYT8 1036 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 DEFB106AQ8N104 65 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 CPSF7Q8N684 471 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 C12orf29Q8N999 325 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 RBM15BQ8NDT2 890 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 RP9Q8TA86 221 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 PHOSPHO1Q8TCT1 267 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 KBTBD7Q8WVZ9 684 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 DLG3Q92796 817 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 TSPAN17Q96FV3 270 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 HIC2Q96JB3 615 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 TTPALQ9BTX7 342 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 JAM3Q9BX67 310 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 EIF2AQ9BY44 585 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 KRTAP4-6Q9BYQ5 205 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 GBA3Q9H227 469 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 Q9H521 79 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 RETREG1Q9H6L5 497 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 C10orf88Q9H8K7 445 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 PLAC1Q9HBJ0 212 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 TRIM39Q9HCM9 518 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 SLC6A20Q9NP91 592 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 SMYD2Q9NRG4 433 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 NMRK1Q9NWW6 199 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 C6orf203Q9P0P8 240 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 NKX1-2Q9UD57 310 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 DSEQ9UL01 958 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 CDH9Q9ULB4 789 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 VANGL2Q9ULK5 521 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 RAP2CQ9Y3L5 183 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 RPS6KL1Q9Y6S9 549 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 SVILO95425 2214 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 VPS13CQ709C8 3753 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 MYO16Q9Y6X6 1858 aa6.43□□□□□ -1.38
ECHDC1-202ENST00000368289 COL6A5A8TX70 2615 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 KIAA1549LQ6ZVL6 1849 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 CCDC189A1A4V9 331 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 RGSL1A5PLK6 1076 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 TRPC5OSA6NMA1 111 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 H0YJX3 145 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 M0QYT0 321 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 TPP1O14773 563 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 CASQ2O14958 399 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 AP1G1O43747 822 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 SEMA7AO75326 666 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 TADA2AO75478 443 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 GRAP2O75791 330 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 RECQL4O94761 1208 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 ABLIM3O94929 683 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 GSRP00390 522 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 ENO1P06733 434 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 FAM200BP0CF97 657 aa6.42□□□□□ -1.38
ECHDC1-202ENST00000368289 GOT1P17174 413 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms