RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 ARL5CA6NH57 179 aa16.51■□□□□ 0.23
NID1-202ENST00000366595 EML1O00423 815 aa16.51■□□□□ 0.23
NID1-202ENST00000366595 CPNE3O75131 537 aaKnown RBP16.51■□□□□ 0.23
NID1-202ENST00000366595 ADH1CP00326 375 aa16.51■□□□□ 0.23
NID1-202ENST00000366595 ITGB1P05556 798 aa16.51■□□□□ 0.23
NID1-202ENST00000366595 PET100P0DJ07 73 aa16.51■□□□□ 0.23
NID1-202ENST00000366595 NR2C1P13056 603 aa16.51■□□□□ 0.23
NID1-202ENST00000366595 CRISP3P54108 245 aa16.51■□□□□ 0.23
NID1-202ENST00000366595 TPRG1LQ5T0D9 272 aa16.51■□□□□ 0.23
NID1-202ENST00000366595 ZNF676Q8N7Q3 588 aa16.51■□□□□ 0.23
NID1-202ENST00000366595 NKD1Q969G9 470 aa16.51■□□□□ 0.23
NID1-202ENST00000366595 ITPAQ9BY32 194 aa16.51■□□□□ 0.23
NID1-202ENST00000366595 DCSTAMPQ9H295 470 aa16.51■□□□□ 0.23
NID1-202ENST00000366595 LGALS2P05162 132 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 SLC35G6P0C7Q6 338 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 MCCD1P59942 119 aaPredicted RBP16.5■□□□□ 0.23
NID1-202ENST00000366595 PTP4A2Q12974 167 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 OR10A6Q8NH74 314 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 BTN2A3PQ96KV6 586 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 FUZQ9BT04 418 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 GBA3Q9H227 469 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 CCSER2Q9H7U1 834 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 ZNF451Q9Y4E5 1061 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 TRIM64A6NGJ6 449 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 AP2A1O95782 977 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 C8GP07360 202 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 HK1P19367 917 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 DDX6P26196 483 aaKnown RBP eCLIP16.5■□□□□ 0.233e-11■■■■□ 22.9
NID1-202ENST00000366595 SLC9A3P48764 834 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 SMAD3P84022 425 aaKnown RBP16.5■□□□□ 0.23
NID1-202ENST00000366595 ZBED6CLQ96FA7 236 aaPredicted RBP16.5■□□□□ 0.23
NID1-202ENST00000366595 TBATAQ96M53 351 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 PFDN5Q99471 154 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 OR51V1Q9H2C8 321 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 MALT1Q9UDY8 824 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 PCDHGA11Q9Y5H2 935 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 UGT1A9O60656 530 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 UGT1A6P19224 532 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 UGT1A1P22309 533 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 UGT1A4P22310 534 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 RPIAP49247 311 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 ALG1LQ6GMV1 187 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 ADGRD2Q7Z7M1 963 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 GALNT12Q8IXK2 581 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 LIX1Q8N485 282 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 SLC37A3Q8NCC5 494 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 SLC16A10Q8TF71 515 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 TCEAL3Q969E4 200 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 PWWP2AQ96N64 755 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 LRRC3Q9BY71 257 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 UGT1A7Q9HAW7 530 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 UGT1A10Q9HAW8 530 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 UGT1A8Q9HAW9 530 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 C14orf166Q9Y224 244 aaKnown RBP16.5■□□□□ 0.23
NID1-202ENST00000366595 NR2E1Q9Y466 385 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 DUXAA6NLW8 204 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 B8ZZF3 427 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 hCG_2039718K7EN88 272 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 TULP2O00295 520 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 ATP5A1P25705 553 aaKnown RBP16.5■□□□□ 0.23
NID1-202ENST00000366595 CASP9P55211 416 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 AIMP2Q13155 320 aaKnown RBP16.5■□□□□ 0.23
NID1-202ENST00000366595 POFUT2Q9Y2G5 429 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 MRPS23Q9Y3D9 190 aaKnown RBP16.5■□□□□ 0.23
NID1-202ENST00000366595 CROCC2H7BZ55 1655 aa16.5■□□□□ 0.23
NID1-202ENST00000366595 CD163L1Q9NR16 1453 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 HLA-DPB1P04440 258 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 PUM1Q14671 1186 aaKnown RBP eCLIP16.49■□□□□ 0.23
NID1-202ENST00000366595 OR4K2Q8NGD2 314 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 KCNMB3Q9NPA1 279 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 PTBP2Q9UKA9 531 aaKnown RBP16.49■□□□□ 0.23
NID1-202ENST00000366595 CNTN6Q9UQ52 1028 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 KDM6BO15054 1643 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 RAB36O95755 333 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 LCN1P31025 176 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 RPL7AP62424 266 aaKnown RBP16.49■□□□□ 0.23
NID1-202ENST00000366595 TARDBPQ13148 414 aaKnown RBP eCLIP16.49■□□□□ 0.23
NID1-202ENST00000366595 NAE1Q13564 534 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 MOGQ16653 247 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 XKR4Q5GH76 650 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 GARNL3Q5VVW2 1013 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 TMEM214Q6NUQ4 689 aaKnown RBP16.49■□□□□ 0.23
NID1-202ENST00000366595 DNM1P34Q6PK57 102 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 ACO2Q99798 780 aaKnown RBP16.49■□□□□ 0.23
NID1-202ENST00000366595 TMEM39AQ9NV64 488 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 PCDHGA12O60330 932 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 MAFO75444 373 aaPredicted RBP16.49■□□□□ 0.23
NID1-202ENST00000366595 AGR2O95994 175 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 ADH1AP07327 375 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 DNAJA1P31689 397 aaKnown RBP16.49■□□□□ 0.23
NID1-202ENST00000366595 IDH3AP50213 366 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 RPS14P62263 151 aaKnown RBP16.49■□□□□ 0.23
NID1-202ENST00000366595 NCSTNQ92542 709 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 GPR21Q99679 349 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 WASF3Q9UPY6 502 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 TIMM22Q9Y584 194 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 TOR1BO14657 336 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 SCAMP3O14828 347 aaKnown RBP16.49■□□□□ 0.23
NID1-202ENST00000366595 ALPPP05187 535 aa16.49■□□□□ 0.23
NID1-202ENST00000366595 S100PP25815 95 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms