RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 GPR21Q99679 349 aa18.7■□□□□ 0.58
HLA-DRB1-201ENST00000360004 CDC42EP4Q9H3Q1 356 aaKnown RBP18.7■□□□□ 0.58
HLA-DRB1-201ENST00000360004 UCK1Q9HA47 277 aa18.7■□□□□ 0.58
HLA-DRB1-201ENST00000360004 NINJ2Q9NZG7 142 aa18.7■□□□□ 0.58
HLA-DRB1-201ENST00000360004 PRAMEF33A0A0G2JMD5 474 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 FAM149AA5PLN7 773 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 B4GAT1O43505 415 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 CSO75390 466 aaKnown RBP18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 GPC4O75487 556 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 UBXN7O94888 489 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 PROS1P07225 676 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 TYRP1P17643 537 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 RGS4P49798 205 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 PRKG2Q13237 762 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 NR1D2Q14995 579 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 UAP1Q16222 522 aaPredicted RBP18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 ZNF658BQ4V348 819 aaPredicted RBP18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 PHF19Q5T6S3 580 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 ZNF549Q6P9A3 640 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 ACVR1CQ8NER5 493 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 ZFPM2Q8WW38 1151 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 LCN9Q8WX39 176 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 MRRFQ96E11 262 aaKnown RBP18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 TMEM74Q96NL1 305 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 CPNE1Q99829 537 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 DPYSL5Q9BPU6 564 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 STRADBQ9C0K7 418 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 RDH14Q9HBH5 336 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 LATS2Q9NRM7 1088 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 POLG2Q9UHN1 485 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 PSAT1Q9Y617 370 aa18.69■□□□□ 0.58
HLA-DRB1-201ENST00000360004 A0A1W2PQM1 296 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 FAM159BA6NKW6 160 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 D6RAR5 112 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 TMX2-CTNND1H3BSU7 103 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 PIAS1O75925 651 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 SLCO2B1O94956 709 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 MCM3P25205 808 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 GABRB3P28472 473 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 ECHS1P30084 290 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 SKIV2L2P42285 1042 aaKnown RBP18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 PRKAA1Q13131 559 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 NAB1Q13506 487 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 KBTBD12Q3ZCT8 623 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 RBM20Q5T481 1227 aaKnown RBP18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 HECTD2Q5U5R9 776 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 XKR5Q6UX68 686 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 CYS1Q717R9 158 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 TMPRSS7Q7RTY8 843 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 VRK3Q8IV63 474 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 GSPT2Q8IYD1 628 aaKnown RBP18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 TBC1D21Q8IYX1 336 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 OR5AR1Q8NGP9 310 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 VPS39Q96JC1 886 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 CYTH2Q99418 400 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 KIR3DX1Q9H7L2 352 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 AKAP7Q9P0M2 348 aaPredicted RBP18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 SLC24A2Q9UI40 661 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 IKBKGQ9Y6K9 419 aa18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 V9GYY5 206 aaPredicted RBP18.68■□□□□ 0.58
HLA-DRB1-201ENST00000360004 PIKFYVEQ9Y2I7 2098 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 FAM95CA0A1B0GW59 222 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 PABPN1LA6NDY0 278 aaKnown RBP18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 NTN3O00634 580 aaPredicted RBP18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 ENO3P13929 434 aaPredicted RBP18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 SPINK2P20155 84 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 CD1CP29017 333 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 ATP5DP30049 168 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 GP5P40197 560 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 CLCN7P51798 805 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 INHBCP55103 352 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 TARDBPQ13148 414 aaKnown RBP eCLIP18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 CLPPQ16740 277 aaPredicted RBP18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 ACSBG2Q5FVE4 666 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 SNAP47Q5SQN1 464 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 UNC5DQ6UXZ4 953 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 OOSP2Q86WS3 158 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 RELL1Q8IUW5 271 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 RAB42Q8N4Z0 105 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 SCNM1Q9BWG6 230 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 SRMSQ9H3Y6 488 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 RHOJQ9H4E5 214 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 SMYD2Q9NRG4 433 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 KLHL42Q9P2K6 505 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 GALPQ9UBC7 116 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 KLHL3Q9UH77 587 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 KLK13Q9UKR3 277 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 ANGPTL2Q9UKU9 493 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 VWA7Q9Y334 891 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 DHRS7Q9Y394 339 aa18.67■□□□□ 0.58
HLA-DRB1-201ENST00000360004 MED19A0JLT2 244 aaPredicted RBP18.66■□□□□ 0.58
HLA-DRB1-201ENST00000360004 CXorf49A8MYA2 514 aaPredicted RBP18.66■□□□□ 0.58
HLA-DRB1-201ENST00000360004 TOP3BO95985 862 aaKnown RBP18.66■□□□□ 0.58
HLA-DRB1-201ENST00000360004 ACADLP28330 430 aa18.66■□□□□ 0.58
HLA-DRB1-201ENST00000360004 SPRP35270 261 aaPredicted RBP18.66■□□□□ 0.58
HLA-DRB1-201ENST00000360004 PMS2P54278 862 aa18.66■□□□□ 0.58
HLA-DRB1-201ENST00000360004 KLHL38Q2WGJ6 581 aa18.66■□□□□ 0.58
HLA-DRB1-201ENST00000360004 CDCP2Q5VXM1 449 aa18.66■□□□□ 0.58
HLA-DRB1-201ENST00000360004 LRRC8EQ6NSJ5 796 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms