RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ERVK-6Q9BXR3 956 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 SLC25A51Q9H1U9 297 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 SIX2Q9NPC8 291 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 ARHGEF4Q9NR80 690 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 TCAF2A6NFQ2 919 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 GRM5P41594 1212 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 KIAA0930Q6ICG6 404 aaPredicted RBP12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 KIAA0319LQ8IZA0 1049 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 ASB12Q8WXK4 309 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 FAM84AQ96KN4 292 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 RSPH9Q9H1X1 276 aaPredicted RBP12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 TREM1Q9NP99 234 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 VWDEQ8N2E2 1590 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 PPRC1Q5VV67 1664 aaKnown RBP12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 FAM159BA6NKW6 160 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 ANXA2P2A6NMY6 339 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 CENPBD1B2RD01 187 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 MCIDASD6RGH6 385 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 H0YJX3 145 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 GTPBP1O00178 669 aaKnown RBP12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 GATBO75879 557 aaKnown RBP12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 ANXA2P07355 339 aaKnown RBP12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 ITPKAP23677 461 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 LCN1P31025 176 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 GTF2A2P52657 109 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 RAB39AQ14964 217 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 OR2T5Q6IEZ7 315 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 OR2T29Q8NH02 315 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 SNIP1Q8TAD8 396 aaKnown RBP12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF641Q96N77 438 aaPredicted RBP12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 COMMD4Q9H0A8 199 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 TFB2MQ9H5Q4 396 aaKnown RBP12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 CD93Q9NPY3 652 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 TRPV2Q9Y5S1 764 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 PLD2O14939 933 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 RPS3P23396 243 aaKnown RBP eCLIP12.52□□□□□ -0.43e-7■■■□□ 17.9
SYNCRIP-201ENST00000355238 GRIA1P42261 906 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 HSPA7P48741 367 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 TAS2R39P59534 338 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 PRAMEF17Q5VTA0 474 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 EFHD2Q96C19 240 aaPredicted RBP12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 TCF7L1Q9HCS4 588 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 IFT46Q9NQC8 304 aa12.52□□□□□ -0.4
SYNCRIP-201ENST00000355238 DIP2AQ14689 1571 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 MAP2P11137 1827 aaKnown RBP12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 LGALS2P05162 132 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 GSTT2P0CG29 244 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 UNGP13051 313 aaPredicted RBP12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 IL7P13232 177 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 LAMP2P13473 410 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 CCSAPQ6IQ19 270 aaPredicted RBP12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 ESRP1Q6NXG1 681 aaKnown RBP12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 TMC8Q8IU68 726 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 TTLL2Q9BWV7 592 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 POLR2J3Q9H1A7 115 aaKnown RBP12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 USP29Q9HBJ7 922 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 UBQLN2Q9UHD9 624 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 PER2O15055 1255 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 SSR2P43308 183 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 AP2S1P53680 142 aaPredicted RBP12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 LAPTM5Q13571 262 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 TSTQ16762 297 aaKnown RBP12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 MYLK3Q32MK0 819 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 RAB12Q6IQ22 244 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 CYP4V2Q6ZWL3 525 aaPredicted RBP12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 PLPPR4Q7Z2D5 763 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 PCSK9Q8NBP7 692 aaKnown RBP12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 CHST4Q8NCG5 386 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 AIF1LQ9BQI0 150 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZSCAN5AQ9BUG6 496 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 TM6SF2Q9BZW4 377 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 RPF2Q9H7B2 306 aaKnown RBP12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 CNTN3Q9P232 1028 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 PCDHB9Q9Y5E1 797 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 M0R233 179 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 HCN1O60741 890 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 CTPS1P17812 591 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 CYP3A5P20815 502 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 GPR1P46091 355 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 C4orf46Q504U0 113 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 CGREF1Q99674 301 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZNF69Q9UC07 566 aa12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 RBM7Q9Y580 266 aaKnown RBP12.52□□□□□ -0.41
SYNCRIP-201ENST00000355238 ITGB1P05556 798 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 TFPTP0C1Z6 253 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 F8A1P23610 371 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 GSK3BP49841 420 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 CLCN4P51793 760 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 CTC1Q2NKJ3 1217 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 CELF3Q5SZQ8 465 aaKnown RBP12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 ANKRD46Q86W74 232 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 C17orf64Q86WR6 236 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 OR10H5Q8NGA6 315 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 AZIN2Q96A70 460 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 MYO19Q96H55 970 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 CNDP2Q96KP4 475 aaKnown RBP12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 CLCC1Q96S66 551 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 TMEM246Q9BRR3 403 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 CHMP1AQ9HD42 196 aaPredicted RBP12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 RGL2O15211 777 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms