RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 ITGA10O75578 1167 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PKMP14618 531 aaKnown RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 CDK10Q15131 360 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ABHD5Q8WTS1 349 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 POLR3BQ9NW08 1133 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TIMM22Q9Y584 194 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PHF19Q5T6S3 580 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 VSTM1Q6UX27 236 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 P2RY11Q96G91 374 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 COMMD3Q9UBI1 195 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 M0R129 80 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 MSI1O43347 362 aaKnown RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 CSTBP04080 98 aaKnown RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 UBXN2BQ14CS0 331 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF709Q8N972 641 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF347Q96SE7 839 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 CIB1Q99828 191 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TMEM121BQ9BXQ6 578 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TREM1Q9NP99 234 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 NR2E1Q9Y466 385 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 LAG3P18627 525 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ALG10BQ5I7T1 473 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ARHGAP9Q9BRR9 750 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 SLCO1B3Q9NPD5 702 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 NUDT4Q9NZJ9 180 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 GLUD2P49448 558 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 C9orf57Q5W0N0 161 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 EIF5AL1Q6IS14 154 aaKnown RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 CRELD2Q6UXH1 353 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PLPPR4Q7Z2D5 763 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 SAMD14Q8IZD0 417 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 DEFB118Q96PH6 123 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TBX5Q99593 518 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TBX1O43435 398 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 BPGMP07738 259 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 CRHR1P34998 444 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PDPRQ8NCN5 879 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 NXNL1Q96CM4 212 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 IPPKQ9H8X2 491 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF282Q9UDV7 671 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 RAB21Q9UL25 225 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 OR2AG2A6NM03 316 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ENPP3O14638 875 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 CYP3A4P08684 503 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ANXA4P09525 319 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 STOMP27105 288 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 RFX5P48382 616 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PER3P56645 1201 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 EGFLAMQ63HQ2 1017 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 LINGO4Q6UY18 593 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 NAXEQ8NCW5 288 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 GPR151Q8TDV0 419 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 GPR21Q99679 349 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF717Q9BY31 904 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PLCL2Q9UPR0 1127 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 MED14O60244 1454 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PCDHGA12O60330 932 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 NDST3O95803 873 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PTGS2P35354 604 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ANKRD46Q86W74 232 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PROKR2Q8NFJ6 384 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 OR10A6Q8NH74 314 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC22A8Q8TCC7 542 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TSPAN18Q96SJ8 248 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 UCK2Q9BZX2 261 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 SEC61A2Q9H9S3 476 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 SDHAF3Q9NRP4 125 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TISP43B9A030 160 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 S100A10P60903 97 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 OTOP3Q7RTS5 596 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 SLITRK4Q8IW52 837 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 CDT1Q9H211 546 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 HSPA12AO43301 675 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 POP4O95707 220 aaKnown RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 OR12D2P58182 307 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 CLCQ05315 142 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 CARTPTQ16568 116 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 NXPE1Q8N323 547 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 LRRC52Q8N7C0 313 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 SPPL2BQ8TCT7 592 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 MFSD3Q96ES6 412 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 POLMQ9NP87 494 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PCDHGB2Q9Y5G2 931 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF16P17020 682 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TNFRSF8P28908 595 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TARDBPQ13148 414 aaKnown RBP eCLIP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 CBLBQ13191 982 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PAQR7Q86WK9 346 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 DNAAF2Q9NVR5 837 aaKnown RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 MALT1Q9UDY8 824 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PRAMEF1O95521 474 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 AGXTP21549 392 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 DCDC1P59894 354 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 RPL7AP62424 266 aaKnown RBP5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 TMEM220Q6QAJ8 160 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 BBS12Q6ZW61 710 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 DCBLD1Q8N8Z6 715 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 PSKH2Q96QS6 385 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 FZD1Q9UP38 647 aa5.69□□□□□ -1.5
SRGAP1-201ENST00000355086 RIC1Q4ADV7 1423 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms