RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 EDEM2Q9BV94 578 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 DERL2Q9GZP9 239 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 PCMTD2Q9NV79 361 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 TSR3Q9UJK0 312 aaKnown RBP23.69■■□□□ 1.38
HMGA2-201ENST00000354636 OTOGLQ3ZCN5 2332 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 FFAR2O15552 330 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 COL6A2P12110 1019 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 KRT4P19013 534 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 CCNFP41002 786 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 HALP42357 657 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 IYDQ6PHW0 289 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 PRR23CQ6ZRP0 262 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 CLEC14AQ86T13 490 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 NAGSQ8N159 534 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 MYO1HQ8N1T3 1032 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 PLD6Q8N2A8 252 aaKnown RBP23.69■■□□□ 1.38
HMGA2-201ENST00000354636 SPATA6LQ8N4H0 392 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 KCTD4Q8WVF5 259 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 PKNOX2Q96KN3 472 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 INSM2Q96T92 566 aaPredicted RBP23.69■■□□□ 1.38
HMGA2-201ENST00000354636 ACBD3Q9H3P7 528 aa23.69■■□□□ 1.38
HMGA2-201ENST00000354636 ARHGEF17Q96PE2 2063 aaPredicted RBP23.68■■□□□ 1.38
HMGA2-201ENST00000354636 IFRD1O00458 451 aaPredicted RBP23.68■■□□□ 1.38
HMGA2-201ENST00000354636 CDX4O14627 284 aaPredicted RBP23.68■■□□□ 1.38
HMGA2-201ENST00000354636 LTA4HP09960 611 aaKnown RBP23.68■■□□□ 1.38
HMGA2-201ENST00000354636 SLC18A2Q05940 514 aa23.68■■□□□ 1.38
HMGA2-201ENST00000354636 ABRQ12979 859 aa23.68■■□□□ 1.38
HMGA2-201ENST00000354636 RASGRP3Q8IV61 690 aa23.68■■□□□ 1.38
HMGA2-201ENST00000354636 SRRM1Q8IYB3 904 aaKnown RBP23.68■■□□□ 1.38
HMGA2-201ENST00000354636 ZDHHC1Q8WTX9 485 aa23.68■■□□□ 1.38
HMGA2-201ENST00000354636 SKA2Q8WVK7 121 aaPredicted RBP23.68■■□□□ 1.38
HMGA2-201ENST00000354636 TFGQ92734 400 aaPredicted RBP23.68■■□□□ 1.38
HMGA2-201ENST00000354636 NXNL1Q96CM4 212 aa23.68■■□□□ 1.38
HMGA2-201ENST00000354636 C12orf66Q96MD2 445 aa23.68■■□□□ 1.38
HMGA2-201ENST00000354636 RXFP3Q9NSD7 469 aa23.68■■□□□ 1.38
HMGA2-201ENST00000354636 IGSF5Q9NSI5 407 aa23.68■■□□□ 1.38
HMGA2-201ENST00000354636 SENP1Q9P0U3 644 aa23.68■■□□□ 1.38
HMGA2-201ENST00000354636 RUVBL2Q9Y230 463 aaKnown RBP23.68■■□□□ 1.38
HMGA2-201ENST00000354636 CABIN1Q9Y6J0 2220 aa23.68■■□□□ 1.38
HMGA2-201ENST00000354636 OR5K4A6NMS3 321 aa23.67■■□□□ 1.38
HMGA2-201ENST00000354636 OPA1O60313 960 aa23.67■■□□□ 1.38
HMGA2-201ENST00000354636 KLHL2O95198 593 aa23.67■■□□□ 1.38
HMGA2-201ENST00000354636 CD1DP15813 335 aa23.67■■□□□ 1.38
HMGA2-201ENST00000354636 RPE65Q16518 533 aa23.67■■□□□ 1.38
HMGA2-201ENST00000354636 OGFOD3Q6PK18 319 aa23.67■■□□□ 1.38
HMGA2-201ENST00000354636 EXOC3L1Q86VI1 746 aa23.67■■□□□ 1.38
HMGA2-201ENST00000354636 SFTPA2Q8IWL1 248 aa23.67■■□□□ 1.38
HMGA2-201ENST00000354636 C4orf33Q8N1A6 199 aa23.67■■□□□ 1.38
HMGA2-201ENST00000354636 ASB11Q8WXH4 323 aa23.67■■□□□ 1.38
HMGA2-201ENST00000354636 STMN4Q9H169 189 aaPredicted RBP23.67■■□□□ 1.38
HMGA2-201ENST00000354636 TMEM9BQ9NQ34 198 aa23.67■■□□□ 1.38
HMGA2-201ENST00000354636 NLGN3Q9NZ94 848 aa23.67■■□□□ 1.38
HMGA2-201ENST00000354636 ZNF624Q9P2J8 865 aaPredicted RBP23.67■■□□□ 1.38
HMGA2-201ENST00000354636 CFAP20Q9Y6A4 193 aaKnown RBP23.67■■□□□ 1.38
HMGA2-201ENST00000354636 OR52A4PA6NMU1 304 aa23.66■■□□□ 1.38
HMGA2-201ENST00000354636 GFYI3L273 518 aa23.66■■□□□ 1.38
HMGA2-201ENST00000354636 TOP3BO95985 862 aaKnown RBP23.66■■□□□ 1.38
HMGA2-201ENST00000354636 SLC2A4P14672 509 aa23.66■■□□□ 1.38
HMGA2-201ENST00000354636 ATP6V0D1P61421 351 aa23.66■■□□□ 1.38
HMGA2-201ENST00000354636 FAM83EQ2M2I3 478 aa23.66■■□□□ 1.38
HMGA2-201ENST00000354636 C6orf132Q5T0Z8 1188 aa23.66■■□□□ 1.38
HMGA2-201ENST00000354636 DBX2Q6ZNG2 339 aa23.66■■□□□ 1.38
HMGA2-201ENST00000354636 SFRP1Q8N474 314 aa23.66■■□□□ 1.38
HMGA2-201ENST00000354636 PATE1Q8WXA2 126 aa23.66■■□□□ 1.38
HMGA2-201ENST00000354636 ARL8AQ96BM9 186 aa23.66■■□□□ 1.38
HMGA2-201ENST00000354636 GPR78Q96P69 363 aa23.66■■□□□ 1.38
HMGA2-201ENST00000354636 UNKQ9C0B0 810 aaKnown RBP23.66■■□□□ 1.38
HMGA2-201ENST00000354636 NMRAL1Q9HBL8 299 aa23.66■■□□□ 1.38
HMGA2-201ENST00000354636 ZNF358Q9NW07 568 aa23.66■■□□□ 1.38
HMGA2-201ENST00000354636 IKZF3Q9UKT9 509 aa23.66■■□□□ 1.38
HMGA2-201ENST00000354636 PCDHGB2Q9Y5G2 931 aa23.66■■□□□ 1.38
HMGA2-201ENST00000354636 KIR2DS5A0A0G2JLQ3 304 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 A0A0G2JNG1 304 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 B4DGG1 531 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 KIR2DS3K7RE56 304 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 ZBTB14O43829 449 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 FOXD2O60548 495 aaPredicted RBP23.65■■□□□ 1.38
HMGA2-201ENST00000354636 PSIP1O75475 530 aaKnown RBP23.65■■□□□ 1.38
HMGA2-201ENST00000354636 MAPK9P45984 424 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 KIR2DS5Q14953 304 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 SUZ12Q15022 739 aaKnown RBP23.65■■□□□ 1.38
HMGA2-201ENST00000354636 AGBL2Q5U5Z8 902 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 UNC5DQ6UXZ4 953 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 LCA5Q86VQ0 697 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 C17orf82Q86X59 251 aaPredicted RBP23.65■■□□□ 1.38
HMGA2-201ENST00000354636 CFAP61Q8NHU2 1237 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 TLCD1Q96CP7 247 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 FOPNLQ96NB1 174 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 DUSP23Q9BVJ7 150 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 IMP3Q9NV31 184 aaKnown RBP23.65■■□□□ 1.38
HMGA2-201ENST00000354636 SIRPGQ9P1W8 387 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 NOVA2Q9UNW9 492 aaKnown RBP23.65■■□□□ 1.38
HMGA2-201ENST00000354636 ASF1AQ9Y294 204 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 ACTL7BQ9Y614 415 aa23.65■■□□□ 1.38
HMGA2-201ENST00000354636 EP300Q09472 2414 aaPredicted RBP23.65■■□□□ 1.38
HMGA2-201ENST00000354636 TRBV23OR9-2A0A075B6M9 112 aa23.64■■□□□ 1.38
HMGA2-201ENST00000354636 NOBOXO60393 691 aa23.64■■□□□ 1.38
HMGA2-201ENST00000354636 ALPPL2P10696 532 aa23.64■■□□□ 1.38
HMGA2-201ENST00000354636 MTHFD1P11586 935 aaKnown RBP23.64■■□□□ 1.38
HMGA2-201ENST00000354636 CREB1P16220 341 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms