RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CTSOP43234 321 aaPredicted RBP13.46□□□□□ -0.25
SMC6-201ENST00000351948 TCEAL1Q15170 157 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 ZNF805Q5CZA5 627 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 ERN2Q76MJ5 926 aaKnown RBP13.46□□□□□ -0.25
SMC6-201ENST00000351948 ADAMTS15Q8TE58 950 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 PHF10Q8WUB8 498 aaKnown RBP13.46□□□□□ -0.25
SMC6-201ENST00000351948 JPH3Q8WXH2 748 aaPredicted RBP13.46□□□□□ -0.25
SMC6-201ENST00000351948 KCNA7Q96RP8 456 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 GPR22Q99680 433 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 NDEL1Q9GZM8 345 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 FANCEQ9HB96 536 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 OXSMQ9NWU1 459 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 SAGE1Q9NXZ1 904 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 ADGRE2Q9UHX3 823 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 POLR1DQ9Y2S0 133 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 TGDSO95455 350 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 CLPTM1O96005 669 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 ARSAP15289 507 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 BLKP51451 505 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 HK2P52789 917 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 PON2Q15165 354 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 PAQR9Q6ZVX9 377 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 GLMNQ92990 594 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 PTCD3Q96EY7 689 aaKnown RBP13.46□□□□□ -0.25
SMC6-201ENST00000351948 C9orf16Q9BUW7 83 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 RC3H2Q9HBD1 1191 aaKnown RBP13.46□□□□□ -0.25
SMC6-201ENST00000351948 RAPGEFL1Q9UHV5 662 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 SAMHD1Q9Y3Z3 626 aaKnown RBP13.46□□□□□ -0.25
SMC6-201ENST00000351948 PCDHGA11Q9Y5H2 935 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 PIAS3Q9Y6X2 628 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 DDX60LQ5H9U9 1706 aaKnown RBP13.46□□□□□ -0.25
SMC6-201ENST00000351948 MYH7BA7E2Y1 1941 aa13.46□□□□□ -0.26
SMC6-201ENST00000351948 SNTNA6NMZ2 147 aa13.46□□□□□ -0.26
SMC6-201ENST00000351948 ATF6P18850 670 aa13.46□□□□□ -0.26
SMC6-201ENST00000351948 SERPINB10P48595 397 aa13.46□□□□□ -0.26
SMC6-201ENST00000351948 SCAPQ12770 1279 aa13.46□□□□□ -0.26
SMC6-201ENST00000351948 TMEM115Q12893 351 aaPredicted RBP13.46□□□□□ -0.26
SMC6-201ENST00000351948 BIKQ13323 160 aa13.46□□□□□ -0.26
SMC6-201ENST00000351948 C1orf61Q13536 156 aa13.46□□□□□ -0.26
SMC6-201ENST00000351948 PTCHD3Q3KNS1 767 aa13.46□□□□□ -0.26
SMC6-201ENST00000351948 RTN4RL1Q86UN2 441 aaPredicted RBP13.46□□□□□ -0.26
SMC6-201ENST00000351948 NXPE1Q8N323 547 aa13.46□□□□□ -0.26
SMC6-201ENST00000351948 FBXW8Q8N3Y1 598 aa13.46□□□□□ -0.26
SMC6-201ENST00000351948 USP54Q70EL1 1684 aa13.46□□□□□ -0.26
SMC6-201ENST00000351948 FAM58BPP0C7Q3 252 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 ZNF30P17039 623 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 S100A5P33763 92 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 RYKP34925 604 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 YAP1P46937 504 aaKnown RBP13.45□□□□□ -0.26
SMC6-201ENST00000351948 PXNP49023 591 aaPredicted RBP13.45□□□□□ -0.26
SMC6-201ENST00000351948 SPIBQ01892 262 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 GPR141Q7Z602 305 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 MIPEPQ99797 713 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 SLC46A2Q9BY10 475 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 ABLIM1O14639 778 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 SMAD6O43541 496 aaKnown RBP13.45□□□□□ -0.26
SMC6-201ENST00000351948 OR6A2O95222 327 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 CHRM1P11229 460 aaPredicted RBP13.45□□□□□ -0.26
SMC6-201ENST00000351948 NCK1P16333 377 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 AGTR2P50052 363 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 MEF2AQ02078 507 aaPredicted RBP13.45□□□□□ -0.26
SMC6-201ENST00000351948 UAP1L1Q3KQV9 507 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 ATP13A5Q4VNC0 1218 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 PSAPL1Q6NUJ1 521 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 NET1Q7Z628 596 aaPredicted RBP13.45□□□□□ -0.26
SMC6-201ENST00000351948 ZDHHC14Q8IZN3 488 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 MRPL43Q8N983 215 aaKnown RBP13.45□□□□□ -0.26
SMC6-201ENST00000351948 CNPPD1Q9BV87 410 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 XKR8Q9H6D3 395 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 ZNF229Q9UJW7 825 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 RPS6KA6Q9UK32 745 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 PPIEQ9UNP9 301 aaKnown RBP13.45□□□□□ -0.26
SMC6-201ENST00000351948 FAM149AA5PLN7 773 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 GSC2O15499 205 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 OR10H3O60404 316 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 SCN2BO60939 215 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 GNSP15586 552 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 IMPDH1P20839 514 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 PACS2Q86VP3 889 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 HEATR4Q86WZ0 1026 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 SIX5Q8N196 739 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 GAL3ST4Q96RP7 486 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 C3orf14Q9HBI5 128 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 SSU72Q9NP77 194 aaKnown RBP13.45□□□□□ -0.26
SMC6-201ENST00000351948 C1orf109Q9NX04 203 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 MYH15Q9Y2K3 1946 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 SRRM3A6NNA2 597 aaPredicted RBP13.45□□□□□ -0.26
SMC6-201ENST00000351948 CHURC1-FNTBB4DL54 471 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 GRID2O43424 1007 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 CNOT3O75175 753 aaKnown RBP13.45□□□□□ -0.26
SMC6-201ENST00000351948 SLC6A4P31645 630 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 ZNF33AQ06730 810 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 DGCR6Q14129 220 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 SIX1Q15475 284 aaPredicted RBP13.45□□□□□ -0.26
SMC6-201ENST00000351948 BEND5Q7L4P6 421 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 ANKLE1Q8NAG6 615 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 SHDQ96IW2 340 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 OR52B2Q96RD2 323 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 RTKNQ9BST9 563 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 ZDHHC2Q9UIJ5 367 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms