RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 WDR83Q9BRX9 315 aaKnown RBP21.52■■□□□ 1.04
SNX3-202ENST00000349379 TRIM31Q9BZY9 425 aa21.52■■□□□ 1.04
SNX3-202ENST00000349379 PKD1L2Q7Z442 2459 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 UBA6A0AVT1 1052 aaPredicted RBP21.51■■□□□ 1.03
SNX3-202ENST00000349379 OR5K3A6NET4 321 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 B4E171 279 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 PFDN6O15212 129 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 NVLO15381 856 aaKnown RBP21.51■■□□□ 1.03
SNX3-202ENST00000349379 SLCO2B1O94956 709 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 TTC4O95801 387 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 ESR1P03372 595 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 CSTF2P33240 577 aaKnown RBP eCLIP21.51■■□□□ 1.03
SNX3-202ENST00000349379 TSPAN7P41732 249 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 MRPS25P82663 173 aaKnown RBP21.51■■□□□ 1.03
SNX3-202ENST00000349379 THOC5Q13769 683 aaKnown RBP21.51■■□□□ 1.03
SNX3-202ENST00000349379 BRD3Q15059 726 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 BBS9Q3SYG4 887 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 SYTL3Q4VX76 610 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 ZNF789Q5FWF6 425 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 SPANXN3Q5MJ09 141 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 SNAP47Q5SQN1 464 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 PTRHD1Q6GMV3 140 aaKnown RBP21.51■■□□□ 1.03
SNX3-202ENST00000349379 PRSS42Q7Z5A4 293 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 VRK3Q8IV63 474 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 DENND6AQ8IWF6 608 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 ASZ1Q8WWH4 475 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 LRRC39Q96DD0 335 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 TGM7Q96PF1 710 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 FERD3LQ96RJ6 166 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 ERP44Q9BS26 406 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 TFB2MQ9H5Q4 396 aaKnown RBP21.51■■□□□ 1.03
SNX3-202ENST00000349379 OCIAD1Q9NX40 245 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 VPS9D1Q9Y2B5 631 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 SNX24Q9Y343 169 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 TEX264Q9Y6I9 313 aa21.51■■□□□ 1.03
SNX3-202ENST00000349379 A8MU76 341 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 E7ESA3 106 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 AGRPO00253 132 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 NDC80O14777 642 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 APOA4P06727 396 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 SLC5A2P31639 672 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 SLC1A2P43004 574 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 PPP1CAP62136 330 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 HIF1AQ16665 826 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 UNC5BQ8IZJ1 945 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 BBOF1Q8ND07 529 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 ZNF248Q8NDW4 579 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 PHC3Q8NDX5 983 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 CALML6Q8TD86 181 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 ZDHHC12Q96GR4 267 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 ZNF768Q9H5H4 540 aaKnown RBP21.5■■□□□ 1.03
SNX3-202ENST00000349379 LATS2Q9NRM7 1088 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 C20orf96Q9NUD7 363 aaPredicted RBP21.5■■□□□ 1.03
SNX3-202ENST00000349379 SIDT1Q9NXL6 827 aaKnown RBP21.5■■□□□ 1.03
SNX3-202ENST00000349379 KLHL3Q9UH77 587 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 CRYL1Q9Y2S2 319 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 PCDHGA3Q9Y5H0 932 aa21.5■■□□□ 1.03
SNX3-202ENST00000349379 LAMA5O15230 3695 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 ZZEF1O43149 2961 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 C9orf172C9J069 976 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 H3BMM5 538 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 KPNA5O15131 536 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 NIPSNAP2O75323 286 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 TUBB4AP04350 444 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 PKMP14618 531 aaKnown RBP21.49■■□□□ 1.03
SNX3-202ENST00000349379 FMO4P31512 558 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 ELK3P41970 407 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 ARL4CP56559 192 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 CKAP4Q07065 602 aaKnown RBP21.49■■□□□ 1.03
SNX3-202ENST00000349379 HSPA14Q0VDF9 509 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 CTBP1Q13363 440 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 KRT33BQ14525 404 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 GBX1Q14549 363 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 DUPD1Q68J44 220 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 KCNMB4Q86W47 210 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 OOSP2Q86WS3 158 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 TBC1D21Q8IYX1 336 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 OR52E1Q8NGJ3 308 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 OR5AR1Q8NGP9 310 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 OR5K2Q8NHB8 316 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 KLHL6Q8WZ60 621 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 USP7Q93009 1102 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 CD180Q99467 661 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 TWSG1Q9GZX9 223 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 WHRNQ9P202 907 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 ASF1AQ9Y294 204 aa21.49■■□□□ 1.03
SNX3-202ENST00000349379 PTPRQQ9UMZ3 2332 aa21.48■■□□□ 1.03
SNX3-202ENST00000349379 EFCAB7A8K855 629 aa21.48■■□□□ 1.03
SNX3-202ENST00000349379 KIF1CO43896 1103 aaKnown RBP21.48■■□□□ 1.03
SNX3-202ENST00000349379 PRAMEF10O60809 474 aa21.48■■□□□ 1.03
SNX3-202ENST00000349379 MAPK10P53779 464 aa21.48■■□□□ 1.03
SNX3-202ENST00000349379 CSE1LP55060 971 aaKnown RBP21.48■■□□□ 1.03
SNX3-202ENST00000349379 TMED2Q15363 201 aa21.48■■□□□ 1.03
SNX3-202ENST00000349379 HSP90AA5PQ58FG0 334 aa21.48■■□□□ 1.03
SNX3-202ENST00000349379 PLEKHS1Q5SXH7 462 aa21.48■■□□□ 1.03
SNX3-202ENST00000349379 STEAP4Q687X5 459 aa21.48■■□□□ 1.03
SNX3-202ENST00000349379 IRGCQ6NXR0 463 aa21.48■■□□□ 1.03
SNX3-202ENST00000349379 CNTN4Q8IWV2 1026 aa21.48■■□□□ 1.03
SNX3-202ENST00000349379 PMEPA1Q969W9 287 aa21.48■■□□□ 1.03
SNX3-202ENST00000349379 TAAR9Q96RI9 348 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms