RNA–Protein interactions for RNA: ENST00000349258.8

THSD1-202, Transcript of thrombospondin type 1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene THSD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-202ENST00000349258 GSTA3Q16772 222 aa16.38■□□□□ 0.21
THSD1-202ENST00000349258 FAM109BQ6ICB4 259 aaPredicted RBP16.38■□□□□ 0.21
THSD1-202ENST00000349258 KCTD14Q9BQ13 255 aaPredicted RBP16.38■□□□□ 0.21
THSD1-202ENST00000349258 FAM83DQ9H4H8 585 aa16.38■□□□□ 0.21
THSD1-202ENST00000349258 PFDN4Q9NQP4 134 aa16.38■□□□□ 0.21
THSD1-202ENST00000349258 PTBP2Q9UKA9 531 aaKnown RBP16.38■□□□□ 0.21
THSD1-202ENST00000349258 ERVW-1Q9UQF0 538 aa16.38■□□□□ 0.21
THSD1-202ENST00000349258 HIST1H2AGP0C0S8 130 aaPredicted RBP16.37■□□□□ 0.21
THSD1-202ENST00000349258 HIST1H2ADP20671 130 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 XKR7Q5GH72 579 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 KIAA2013Q8IYS2 634 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 VOPP1Q96AW1 172 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 HIST1H2AHQ96KK5 128 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 SLC29A1Q99808 456 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 HIST1H2AJQ99878 128 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 H2AFJQ9BTM1 129 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 TBCDQ9BTW9 1192 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 ALG2Q9H553 416 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 CNOT6Q9ULM6 557 aaKnown RBP16.37■□□□□ 0.21
THSD1-202ENST00000349258 PDE10AQ9Y233 779 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 SLC22A14Q9Y267 594 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 OARD1Q9Y530 152 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 PRSS51A0A1B0GVH4 220 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 A6NHS1 94 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 ANXA5P08758 320 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 ELMSAN1Q6PJG2 1045 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 SPATA19Q7Z5L4 167 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 ANKRD46Q86W74 232 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 C12orf40Q86WS4 652 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 ROPN1LQ96C74 230 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 HEPHQ9BQS7 1158 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 NUSAP1Q9BXS6 441 aaKnown RBP16.37■□□□□ 0.21
THSD1-202ENST00000349258 KCTD5Q9NXV2 234 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 TRANK1O15050 2925 aa16.37■□□□□ 0.21
THSD1-202ENST00000349258 KANSL1LA0AUZ9 987 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 VPS4BO75351 444 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 B3GALT4O96024 378 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 GSNP06396 782 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 CTSLP07711 333 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 PSMA3P25788 255 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 HALP42357 657 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 GSK3BP49841 420 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 ILF2Q12905 390 aaKnown RBP16.36■□□□□ 0.21
THSD1-202ENST00000349258 PTCHD3Q3KNS1 767 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 TMEM240Q5SV17 173 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 FBXO46Q6PJ61 603 aaPredicted RBP16.36■□□□□ 0.21
THSD1-202ENST00000349258 MED8Q96G25 268 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 TSSK3Q96PN8 268 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 MRGBPQ9NV56 204 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 K7EPI3 171 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 PCNAP12004 261 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 ATP4BP51164 291 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 PCBP2Q15366 365 aaKnown RBP eCLIP16.36■□□□□ 0.21
THSD1-202ENST00000349258 FAM174BQ3ZCQ3 159 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 NANOGP8Q6NSW7 305 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 EFL1Q7Z2Z2 1120 aaKnown RBP16.36■□□□□ 0.21
THSD1-202ENST00000349258 RGL4Q8IZJ4 473 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 LIX1Q8N485 282 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 OR2T34Q8NGX1 318 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 OR2T3Q8NH03 318 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 CLP1Q92989 425 aaKnown RBP16.36■□□□□ 0.21
THSD1-202ENST00000349258 NANOGQ9H9S0 305 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 MRPL40Q9NQ50 206 aaKnown RBP16.36■□□□□ 0.21
THSD1-202ENST00000349258 WBP1LQ9NX94 342 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 C15orf38-AP3S2A0A0A6YYH1 394 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 TRBV5-4A0A0C4DH59 114 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 LSM1O15116 133 aaKnown RBP16.36■□□□□ 0.21
THSD1-202ENST00000349258 ARPC2O15144 300 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 MSH3P20585 1137 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 EFNA1P20827 205 aaPredicted RBP16.36■□□□□ 0.21
THSD1-202ENST00000349258 LBX1P52954 281 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 POLR2LP62875 67 aaKnown RBP16.36■□□□□ 0.21
THSD1-202ENST00000349258 RCAN2Q14206 197 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 SELPLGQ14242 412 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 SF1Q15637 639 aaKnown RBP16.36■□□□□ 0.21
THSD1-202ENST00000349258 MACC1Q6ZN28 852 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 ARPINQ7Z6K5 226 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 SELENOMQ8WWX9 145 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 P2RY13Q9BPV8 354 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 THUMPD3Q9BV44 507 aaKnown RBP16.36■□□□□ 0.21
THSD1-202ENST00000349258 DUS2Q9NX74 493 aaKnown RBP16.36■□□□□ 0.21
THSD1-202ENST00000349258 UBAP1Q9NZ09 502 aa16.36■□□□□ 0.21
THSD1-202ENST00000349258 BBIP1A8MTZ0 92 aa16.35■□□□□ 0.21
THSD1-202ENST00000349258 ATP1B2P14415 290 aaPredicted RBP16.35■□□□□ 0.21
THSD1-202ENST00000349258 RPS3P23396 243 aaKnown RBP eCLIP16.35■□□□□ 0.21
THSD1-202ENST00000349258 HTRA4P83105 476 aaPredicted RBP16.35■□□□□ 0.21
THSD1-202ENST00000349258 TMEM102Q8N9M5 508 aaPredicted RBP16.35■□□□□ 0.21
THSD1-202ENST00000349258 PDLIM5Q96HC4 596 aaKnown RBP16.35■□□□□ 0.21
THSD1-202ENST00000349258 LMLNQ96KR4 655 aa16.35■□□□□ 0.21
THSD1-202ENST00000349258 HOPXQ9BPY8 73 aaPredicted RBP16.35■□□□□ 0.21
THSD1-202ENST00000349258 PKD2L2Q9NZM6 624 aa16.35■□□□□ 0.21
THSD1-202ENST00000349258 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.35■□□□□ 0.21
THSD1-202ENST00000349258 LEF1Q9UJU2 399 aaPredicted RBP16.35■□□□□ 0.21
THSD1-202ENST00000349258 DHRS12A0PJE2 317 aa16.35■□□□□ 0.21
THSD1-202ENST00000349258 NFKBIAP25963 317 aa16.35■□□□□ 0.21
THSD1-202ENST00000349258 SLC6A11P48066 632 aa16.35■□□□□ 0.21
THSD1-202ENST00000349258 CSNK1DP48730 415 aa16.35■□□□□ 0.21
THSD1-202ENST00000349258 DGKGP49619 791 aa16.35■□□□□ 0.21
THSD1-202ENST00000349258 POLE2P56282 527 aa16.35■□□□□ 0.21
THSD1-202ENST00000349258 PLOD1Q02809 727 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms