RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 KERAO60938 352 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 PMPCBO75439 489 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 PRKD3O94806 890 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 INMTO95050 263 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 SCELO95171 688 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 LINC00032P0C843 101 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 MSH3P20585 1137 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 UGT2B10P36537 528 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 CDKN2DP55273 166 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 CDH13P55290 713 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 KCNAB2Q13303 367 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 PWP1Q13610 501 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 CTU2Q2VPK5 515 aaKnown RBP15.61■□□□□ 0.09
HMGA1-202ENST00000347617 PGS1Q32NB8 556 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 PYCR3Q53H96 274 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 ZNF789Q5FWF6 425 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 RTP2Q5QGT7 225 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 KDELC1Q6UW63 502 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 ARHGAP12Q8IWW6 846 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 HOMEZQ8IX15 550 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 KIAA1958Q8N8K9 716 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 STAG3L4Q8TBR4 150 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 IGSF21Q96ID5 467 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 CELF6Q96J87 481 aaKnown RBP15.61■□□□□ 0.09
HMGA1-202ENST00000347617 ATOH8Q96SQ7 321 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 AMBRA1Q9C0C7 1298 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 INTS6Q9UL03 887 aaKnown RBP15.61■□□□□ 0.09
HMGA1-202ENST00000347617 PLXNA3P51805 1871 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 FAM172BPA6NC97 362 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 CLDN24A6NM45 220 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 H3BMM5 538 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 LSM1O15116 133 aaKnown RBP15.6■□□□□ 0.09
HMGA1-202ENST00000347617 RPS17P08708 135 aaKnown RBP15.6■□□□□ 0.09
HMGA1-202ENST00000347617 TCF3P15923 654 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 TSPAN8P19075 237 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 CES1P23141 567 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 KCNC1P48547 511 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 DIO3P55073 304 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 WNT3AP56704 352 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 EMX1Q04741 257 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-202ENST00000347617 DDR2Q16832 855 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 PLEKHG6Q3KR16 790 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 ADPRMQ3LIE5 342 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 TMEM207Q6UWW9 146 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 DTWD1Q8N5C7 304 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 ATAD1Q8NBU5 361 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 ZNF486Q96H40 463 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-202ENST00000347617 TMEM74Q96NL1 305 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 SH3GL1Q99961 368 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 DSN1Q9H410 356 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 DUSP21Q9H596 190 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 KAT8Q9H7Z6 458 aaKnown RBP15.6■□□□□ 0.09
HMGA1-202ENST00000347617 HEBP1Q9NRV9 189 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 RBM22Q9NW64 420 aaKnown RBP eCLIP15.6■□□□□ 0.092e-14■■■■□ 21.8
HMGA1-202ENST00000347617 OSER1Q9NX31 292 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 TLR6Q9Y2C9 796 aa15.6■□□□□ 0.09
HMGA1-202ENST00000347617 GNGT2O14610 69 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 SNPHO15079 494 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 GSTA4O15217 222 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 XYLBO75191 536 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 RFPL2O75678 378 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 CNTN5O94779 1100 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 CST1P01037 141 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 HLA-DQB2P05538 268 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 OGNP20774 298 aaKnown RBP15.59■□□□□ 0.09
HMGA1-202ENST00000347617 TUFMP49411 452 aaKnown RBP15.59■□□□□ 0.09
HMGA1-202ENST00000347617 DNASE1L3Q13609 305 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 TIGD2Q4W5G0 525 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 FBXO39Q8N4B4 442 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 FBXO22Q8NEZ5 403 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 RNF34Q969K3 372 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 KIAA1191Q96A73 305 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 TBC1D20Q96BZ9 403 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 SLC39A13Q96H72 371 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 TTLL2Q9BWV7 592 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 OR2B2Q9GZK3 357 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 NMUR1Q9HB89 426 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 TLR8Q9NR97 1041 aaKnown RBP15.59■□□□□ 0.09
HMGA1-202ENST00000347617 OSGIN1Q9UJX0 560 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 RIMKLBQ9ULI2 386 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 MAFFQ9ULX9 164 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 LTBP2Q14767 1821 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 A0A1W2PQH9 124 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 MROH6A6NGR9 719 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 KRT75O95678 551 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 MT-ND1P03886 318 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 MTHFD2P13995 350 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 ZNF37AP17032 561 aaPredicted RBP15.59■□□□□ 0.09
HMGA1-202ENST00000347617 FOXA1P55317 472 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 UFM1P61960 85 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 ACVR1Q04771 509 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 CDK5R2Q13319 367 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 KEAP1Q14145 624 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 PFKFB4Q16877 469 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 TPGS2Q68CL5 300 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 MRNIPQ6NTE8 343 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 RSPO2Q6UXX9 243 aaPredicted RBP15.59■□□□□ 0.09
HMGA1-202ENST00000347617 RNF19BQ6ZMZ0 732 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 PLD3Q8IV08 490 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 SLC7A5P1Q8MH63 180 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms