RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 DET1Q7L5Y6 550 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 RNF180Q86T96 592 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 CLVS1Q8IUQ0 354 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-201ENST00000347613 BBS7Q8IWZ6 715 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 AQP12AQ8IXF9 295 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 RGL4Q8IZJ4 473 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 TRIML2Q8N7C3 387 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 PCYOX1LQ8NBM8 494 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 FBXO30Q8TB52 745 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 NETO1Q8TDF5 533 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 KCNJ9Q92806 393 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 PEX13Q92968 403 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 UBE2FQ969M7 185 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 TMBIM1Q969X1 311 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 PBXIP1Q96AQ6 731 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 CENPNQ96H22 339 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-201ENST00000347613 HIC2Q96JB3 615 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 ZNF382Q96SR6 550 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 SYTL2Q9HCH5 934 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 GPRC5BQ9NZH0 403 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 MTRRQ9UBK8 725 aa5.93□□□□□ -1.46
CLCN3-201ENST00000347613 FBXO9Q9UK97 447 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-201ENST00000347613 CCDC88CQ9P219 2028 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 DOCK9Q9BZ29 2069 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 RNF103-CHMP3A0A140T963 221 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 BBIP1A8MTZ0 92 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 H7C0S8 307 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 BNIP3LO60238 219 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 SNX2O60749 519 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 PQBP1O60828 265 aaKnown RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 MITFO75030 526 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 CLDN11O75508 207 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 HOXB9P17482 250 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 ARL1P40616 181 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 ADARP55265 1226 aaKnown RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 KCNK10P57789 538 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 SP3Q02447 781 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 NFATC2Q13469 925 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 CCSMST1Q4G0I0 132 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 GPRC6AQ5T6X5 926 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 SPRED2Q7Z698 418 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 DNAJB7Q7Z6W7 309 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 PPP1R2P1Q96PQ5 205 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 CLK4Q9HAZ1 481 aaKnown RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 PNPLA3Q9NST1 481 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 COMMD8Q9NX08 183 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 SRRDQ9UH36 339 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 RSL24D1Q9UHA3 163 aaKnown RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 RIMKLBQ9ULI2 386 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 TDRKHQ9Y2W6 561 aaKnown RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 FADS3Q9Y5Q0 445 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 CORINQ9Y5Q5 1042 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 U3KQV3 271 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 KIAA1671Q9BY89 1806 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 C1orf232A0A0U1RR37 186 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 A0A1B0GVM2 712 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 KANSL1LA0AUZ9 987 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 E5RI56 91 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 H0YJX3 145 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 H3BMQ9 156 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 SH3BGRLO75368 114 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 VPS26AO75436 327 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 DIRAS1O95057 198 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 LRATO95237 230 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 PGLSO95336 258 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 GLUD1P00367 558 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 MYCLP1P12525 358 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 SLC2A4P14672 509 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 CD22P20273 847 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 FASP25445 335 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 TGFBR1P36897 503 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 CCR2P41597 374 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 CDK9P50750 372 aaKnown RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 MUC3AQ02505 3323 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 MESP2Q0VG99 397 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 NR6A1Q15406 480 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 ATP13A5Q4VNC0 1218 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 PDCD4Q53EL6 469 aaKnown RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 GPR107Q5VW38 600 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 AP1ARQ63HQ0 302 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 ANKRD26P1Q6NSI1 321 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 NEK5Q6P3R8 708 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 Q6ZNB5 142 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 LPCAT2Q7L5N7 544 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 GPR180Q86V85 440 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 HID1Q8IV36 788 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 PLPP6Q8IY26 295 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 LIX1Q8N485 282 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 COG8Q96MW5 612 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 CGREF1Q99674 301 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 TRIM54Q9BYV2 358 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 ACPTQ9BZG2 426 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 ASB8Q9H765 288 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 HEBP1Q9NRV9 189 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 PHF24Q9UPV7 400 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 BTBD3Q9Y2F9 522 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 YIPF1Q9Y548 306 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 PCDHB14Q9Y5E9 798 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 PCDHGA8Q9Y5G5 932 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 FAM234BA2RU67 622 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms