RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SRSF6Q13247 344 aaKnown RBP14.86□□□□□ -0.03
PRKN-201ENST00000338468 BOP1Q14137 746 aaKnown RBP14.86□□□□□ -0.03
PRKN-201ENST00000338468 LY6DQ14210 128 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 PLCL1Q15111 1095 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 ANKS6Q68DC2 871 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 IRGCQ6NXR0 463 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 FAM92BQ6ZTR7 304 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 PHC3Q8NDX5 983 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 KLHL6Q8WZ60 621 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 TFGQ92734 400 aaPredicted RBP14.86□□□□□ -0.03
PRKN-201ENST00000338468 SPRY4Q9C004 299 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 SEMA4CQ9C0C4 833 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 P2RY12Q9H244 342 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 ZNF768Q9H5H4 540 aaKnown RBP14.86□□□□□ -0.03
PRKN-201ENST00000338468 XAB2Q9HCS7 855 aaKnown RBP14.86□□□□□ -0.03
PRKN-201ENST00000338468 FBXO8Q9NRD0 319 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 CDYLQ9Y232 598 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 HEBP2Q9Y5Z4 205 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 SAR1BQ9Y6B6 198 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 COLEC10Q9Y6Z7 277 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 IGHV5-51A0A0C4DH38 117 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 CYSRT1A8MQ03 144 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 PRMT5O14744 637 aaPredicted RBP14.85□□□□□ -0.03
PRKN-201ENST00000338468 LIPCP11150 499 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 CD82P27701 267 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 NDUFS1P28331 727 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 TTPAP49638 278 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 SEPHS1P49903 392 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 SH3BP2P78314 561 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 VAC14Q08AM6 782 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 PTK6Q13882 451 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 BRD3Q15059 726 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 AARS2Q5JTZ9 985 aaKnown RBP14.85□□□□□ -0.03
PRKN-201ENST00000338468 TMEM164Q5U3C3 297 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 CACHD1Q5VU97 1274 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 ARMC3Q5W041 872 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 KIAA0930Q6ICG6 404 aaPredicted RBP14.85□□□□□ -0.03
PRKN-201ENST00000338468 VRK3Q8IV63 474 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 KRT222Q8N1A0 295 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 ACVR1CQ8NER5 493 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 TTC9Q92623 222 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 ZDHHC12Q96GR4 267 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 SIGLEC10Q96LC7 697 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 FERD3LQ96RJ6 166 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 TTC1Q99614 292 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 CTRCQ99895 268 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 HRASLS2Q9NWW9 162 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 IL1RAPL1Q9NZN1 696 aa14.85□□□□□ -0.03
PRKN-201ENST00000338468 ZCWPW2A0A1B0GU75 182 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 FAM237BA0A1B0GVD1 139 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 CTAGE9A4FU28 777 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 OR6C74A6NCV1 312 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 SDR42E2A6NKP2 422 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 IFRD1O00458 451 aaPredicted RBP14.84□□□□□ -0.03
PRKN-201ENST00000338468 SLC28A2O43868 658 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 GPC4O75487 556 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 RASSF9O75901 435 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 TPBGLP0DKB5 382 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 RAB15P59190 212 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 PPP1R7Q15435 360 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 TYSND1Q2T9J0 566 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 ANKRD20A4Q4UJ75 823 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 DCAF12Q5T6F0 453 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 KLHL35Q6PF15 583 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 TMEM135Q86UB9 458 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 PPIL6Q8IXY8 311 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 OR4E2Q8NGC2 313 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 OR52E1Q8NGJ3 308 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 OR5AR1Q8NGP9 310 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 SNRNP27Q8WVK2 155 aaKnown RBP14.84□□□□□ -0.03
PRKN-201ENST00000338468 MED8Q96G25 268 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 SLC41A2Q96JW4 573 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 PPM1MQ96MI6 270 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 BIRC8Q96P09 236 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 MAP3K3Q99759 626 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 CARD6Q9BX69 1037 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 ASPSCR1Q9BZE9 553 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 MVB12BQ9H7P6 319 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 ANAPC5Q9UJX4 755 aa14.84□□□□□ -0.03
PRKN-201ENST00000338468 PYCARD-AS1I3L0S3 204 aa14.83□□□□□ -0.04
PRKN-201ENST00000338468 BTN3A3O00478 584 aa14.83□□□□□ -0.04
PRKN-201ENST00000338468 DNALI1O14645 258 aaPredicted RBP14.83□□□□□ -0.04
PRKN-201ENST00000338468 NELFEP18615 380 aaKnown RBP14.83□□□□□ -0.04
PRKN-201ENST00000338468 POLR2CP19387 275 aaPredicted RBP14.83□□□□□ -0.04
PRKN-201ENST00000338468 WT1P19544 449 aaPredicted RBP14.83□□□□□ -0.04
PRKN-201ENST00000338468 RPS3P23396 243 aaKnown RBP eCLIP14.83□□□□□ -0.044e-6■■■■■ 40.4
PRKN-201ENST00000338468 AOAHP28039 575 aa14.83□□□□□ -0.04
PRKN-201ENST00000338468 PPARGP37231 505 aaPredicted RBP14.83□□□□□ -0.04
PRKN-201ENST00000338468 KPNA2P52292 529 aaKnown RBP14.83□□□□□ -0.04
PRKN-201ENST00000338468 CSE1LP55060 971 aaKnown RBP14.83□□□□□ -0.04
PRKN-201ENST00000338468 PRKG2Q13237 762 aa14.83□□□□□ -0.04
PRKN-201ENST00000338468 KRT33BQ14525 404 aa14.83□□□□□ -0.04
PRKN-201ENST00000338468 CTSL3PQ5NE16 218 aa14.83□□□□□ -0.04
PRKN-201ENST00000338468 CASC4Q6P4E1 433 aa14.83□□□□□ -0.04
PRKN-201ENST00000338468 CENPUQ71F23 418 aa14.83□□□□□ -0.04
PRKN-201ENST00000338468 OOSP2Q86WS3 158 aa14.83□□□□□ -0.04
PRKN-201ENST00000338468 KLHL7Q8IXQ5 586 aa14.83□□□□□ -0.04
PRKN-201ENST00000338468 SLC22A15Q8IZD6 547 aa14.83□□□□□ -0.04
PRKN-201ENST00000338468 LCN9Q8WX39 176 aa14.83□□□□□ -0.04
PRKN-201ENST00000338468 LPGAT1Q92604 370 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms