RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 DESI2Q9BSY9 194 aa13.2□□□□□ -0.3
GTF3C6-201ENST00000329970 TWSG1Q9GZX9 223 aa13.2□□□□□ -0.3
GTF3C6-201ENST00000329970 FAM96AQ9H5X1 160 aa13.2□□□□□ -0.3
GTF3C6-201ENST00000329970 KCND1Q9NSA2 647 aa13.2□□□□□ -0.3
GTF3C6-201ENST00000329970 A0A0U1RQJ8 604 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 HEATR9A2RTY3 570 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 CCL22O00626 93 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 LIASO43766 372 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 ZIC2O95409 532 aaPredicted RBP13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 FTH1P02794 183 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 TPH1P17752 444 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 FOXN2P32314 431 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 GSDMDP57764 484 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 NFKB2Q00653 900 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 ACVR1Q04771 509 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 ATP1A1-AS1Q5TC04 95 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 SEL1L2Q5TEA6 688 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 LYPLAL1Q5VWZ2 237 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 IZUMO3Q5VZ72 239 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 CERS6Q6ZMG9 384 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 OR4E2Q8NGC2 313 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 OR52E1Q8NGJ3 308 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 CT55Q8WUE5 264 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 LCN9Q8WX39 176 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 ABHD17AQ96GS6 310 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 ALS2CR12Q96Q35 445 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 FERD3LQ96RJ6 166 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 SRMSQ9H3Y6 488 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 FANCEQ9HB96 536 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 FAM8A1Q9UBU6 413 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 PTPN13Q12923 2485 aa13.19□□□□□ -0.3
GTF3C6-201ENST00000329970 GOLGA6L6A8MZA4 724 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 KRT86O43790 486 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 SCRG1O75711 98 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 GAS8O95995 478 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 FURINP09958 794 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 POLR2CP19387 275 aaPredicted RBP13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 CDH3P22223 829 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 MSNP26038 577 aaKnown RBP13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 ACADLP28330 430 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 PTPN4P29074 926 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 PDHA2P29803 388 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 PRDX3P30048 256 aaKnown RBP13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 CASRP41180 1078 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 PMS2P54278 862 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 SEMA5AQ13591 1074 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 ERV3-1Q14264 604 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 UGT8Q16880 541 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 LACTB2Q53H82 288 aaPredicted RBP13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 TCTN3Q6NUS6 607 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 ZNF662Q6ZS27 426 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 TAS2R42Q7RTR8 314 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 SYVN1Q86TM6 617 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 SLC13A5Q86YT5 568 aaPredicted RBP13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 CLDN19Q8N6F1 224 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 OR13J1Q8NGT2 312 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 THAP4Q8WY91 577 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 CPT1BQ92523 772 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 TFGQ92734 400 aaPredicted RBP13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 CHRNA10Q9GZZ6 450 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 ACTL8Q9H568 366 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 ETNK1Q9HBU6 452 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 SOHLH2Q9NX45 425 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 CCDC88CQ9P219 2028 aa13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 SPENQ96T58 3664 aaKnown RBP13.18□□□□□ -0.3
GTF3C6-201ENST00000329970 SLC5A10A0PJK1 596 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 C2orf74A8MZ97 194 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 F8W8V4 182 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 MKRN2OSH3BPM6 223 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 BTN3A3O00478 584 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 BTN3A1O00481 513 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 KATNA1O75449 491 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 NTRK1P04629 796 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 RAB40ALP0C0E4 278 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 PRSS56P0CW18 603 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 ADRA1DP25100 572 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 RPS15P62841 145 aaKnown RBP13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 TLE1Q04724 770 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 GPR19Q15760 415 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 DRICH1Q6PGQ1 229 aaPredicted RBP13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 AFTPHQ6ULP2 937 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 NLRP9Q7RTR0 991 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 AMIGO1Q86WK6 493 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 TMEM126BQ8IUX1 230 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 TBC1D21Q8IYX1 336 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 ADGRF3Q8IZF5 1079 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 DSELQ8IZU8 1212 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 OR52K1Q8NGK4 314 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 ATG4AQ8WYN0 398 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 TRAPPC9Q96Q05 1148 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 TTC1Q99614 292 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 CASS4Q9NQ75 786 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 SMARCAL1Q9NZC9 954 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 POLG2Q9UHN1 485 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 PRSS21Q9Y6M0 314 aa13.17□□□□□ -0.3
GTF3C6-201ENST00000329970 TNRC6AQ8NDV7 1962 aaKnown RBP13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 GSAPA4D1B5 854 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 CDC14CA4D256 554 aa13.16□□□□□ -0.3
GTF3C6-201ENST00000329970 SLC9B1P1A6NJY1 282 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms