RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 METTL21CQ5VZV1 264 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 CRTC3Q6UUV7 619 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 Q6ZSR6 202 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 FRMD7Q6ZUT3 714 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 TRAPPC5Q8IUR0 188 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 ZNF547Q8IVP9 402 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 GAB3Q8WWW8 586 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 PHF21BQ96EK2 531 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 MOCOSQ96EN8 888 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 NSL1Q96IY1 281 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 ERVK-6Q9BXR3 956 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 DUSP15Q9H1R2 295 aaPredicted RBP18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 TMCO1Q9UM00 188 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 PRKAB1Q9Y478 270 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 KMT2EQ8IZD2 1858 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 CAPN14A8MX76 684 aa18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 CBX6O95503 412 aa18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 TSPAN12O95859 305 aa18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 FUCA1P04066 466 aa18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 CEACAM5P06731 702 aa18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 MTHFD2P13995 350 aa18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 NQO1P15559 274 aaKnown RBP18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 CALB2P22676 271 aa18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 CCR10P46092 362 aa18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 NAA20P61599 178 aa18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 RAB44Q7Z6P3 723 aaPredicted RBP18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 PTCD3Q96EY7 689 aaKnown RBP18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 CCDC106Q9BWC9 280 aa18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 COL25A1Q9BXS0 654 aaPredicted RBP18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 AASDHPPTQ9NRN7 309 aa18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 RNF112Q9ULX5 631 aa18.38■□□□□ 0.53
EXOSC3-201ENST00000327304 CHUKO15111 745 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 NUAK1O60285 661 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 DIAPH2O60879 1101 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 CCR7P32248 378 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 LPCAT2Q7L5N7 544 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 NELL1Q92832 810 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 SLC7A6OSQ96CW6 309 aaPredicted RBP18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 PRR11Q96HE9 360 aaPredicted RBP18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 FAR2Q96K12 515 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 PANX3Q96QZ0 392 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 MIR1-1HGQ9H1L0 117 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 GSTO2Q9H4Y5 243 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 FGF22Q9HCT0 170 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 MRPL40Q9NQ50 206 aaKnown RBP18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 ARL8BQ9NVJ2 186 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 SLC17A4Q9Y2C5 497 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 QSOX1O00391 747 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 GRID2O43424 1007 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 HRO43593 1189 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 FTH1P02794 183 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 PBLDP30039 288 aaPredicted RBP18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 RABIFP47224 123 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 ALDH18A1P54886 795 aaKnown RBP18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 YPEL5P62699 121 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 ANGPT1Q15389 498 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 PLA2G4EQ3MJ16 856 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 SLC22A18ASQ8N1D0 253 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 AFAP1L2Q8N4X5 818 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 ZBTB2Q8N680 514 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 EEF1AKMT1Q8WVE0 214 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 LINGO1Q96FE5 620 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 FAM126AQ9BYI3 521 aaPredicted RBP18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 SLC40A1Q9NP59 571 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 ACSS2Q9NR19 701 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 LATS2Q9NRM7 1088 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 SPATS2LQ9NUQ6 558 aaKnown RBP18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 FAM8A1Q9UBU6 413 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 THADAQ6YHU6 1953 aa18.37■□□□□ 0.53
EXOSC3-201ENST00000327304 UBXN8O00124 270 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 KLK8O60259 260 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 RASSF9O75901 435 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 SP9P0CG40 484 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 AOAHP28039 575 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 PTPN4P29074 926 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 TSNQ15631 228 aaKnown RBP18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 UNC50Q53HI1 259 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 VWA5B1Q5TIE3 1220 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 LAYNQ6UX15 382 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 C11orf96Q7Z7L8 435 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 CPNE9Q8IYJ1 553 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 PTGR2Q8N8N7 351 aaPredicted RBP18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 C1orf216Q8TAB5 229 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 AGR3Q8TD06 166 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 MAPK15Q8TD08 544 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 ELMO1Q92556 727 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 ZNF514Q96K75 400 aaPredicted RBP18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 WDR92Q96MX6 357 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 CCM2Q9BSQ5 444 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 TM7SF3Q9NS93 570 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 KLHL42Q9P2K6 505 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 GPR34Q9UPC5 381 aa18.36■□□□□ 0.53
EXOSC3-201ENST00000327304 TRPC5OSA6NMA1 111 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 STX16-NPEPL1H3BU86 382 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 CDC7O00311 574 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 BTN3A1O00481 513 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 TOR1BO14657 336 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 STX16O14662 325 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 MAGEC1O60732 1142 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 SUPT7LO94864 414 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms