RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 PLEKHM1Q9Y4G2 1056 aa10.02□□□□□ -0.81
VIPAS39-201ENST00000327028 NEMP2A6NFY4 417 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 TLR4O00206 839 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 KLF11O14901 512 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 VILLO15195 856 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 TRIM13O60858 407 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 IPO13O94829 963 aaKnown RBP10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 S100BP04271 92 aaPredicted RBP10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 SERPINE1P05121 402 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 SLC35G4P0C7Q5 338 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 NEFHP12036 1026 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 CYP2A7P20853 494 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 ITPKAP23677 461 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 ACADLP28330 430 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 LSP1P33241 339 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 DHPSP49366 369 aaPredicted RBP10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 AFF3P51826 1226 aaKnown RBP10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 NXPH1P58417 271 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 ABRQ12979 859 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 ANGPT1Q15389 498 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 CHI3L2Q15782 390 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 PHKG1Q16816 387 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 CDKL4Q5MAI5 379 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 LAYNQ6UX15 382 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 UNC5DQ6UXZ4 953 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 RD3Q7Z3Z2 195 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 PHACTR4Q8IZ21 702 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 DLG3Q92796 817 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 ZC3H10Q96K80 434 aaKnown RBP10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 MANSC1Q9H8J5 431 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 PARVBQ9HBI1 364 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 CD274Q9NZQ7 290 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 PDE10AQ9Y233 779 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 SCAMP1O15126 338 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 BCAT2O15382 392 aaPredicted RBP10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 FFAR2O15552 330 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 CATP04040 527 aaKnown RBP10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 GFAPP14136 432 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 IDSP22304 550 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 BLKP51451 505 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 CDKL1Q00532 357 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 CTBSQ01459 385 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 CEP68Q76N32 757 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 SPATS2Q86XZ4 545 aaKnown RBP10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 FBXO39Q8N4B4 442 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 PTGR2Q8N8N7 351 aaPredicted RBP10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 PDPRQ8NCN5 879 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 ZBTB44Q8NCP5 570 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 FBXO15Q8NCQ5 510 aaPredicted RBP10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 OR6Y1Q8NGX8 325 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 PPP1R14CQ8TAE6 165 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 TRIM54Q9BYV2 358 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 ZDHHC5Q9C0B5 715 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 WWP1Q9H0M0 922 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 TMEM168Q9H0V1 697 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 OSGEPL1Q9H4B0 414 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 NCKIPSDQ9NZQ3 722 aa10.01□□□□□ -0.81
VIPAS39-201ENST00000327028 PABPN1LA6NDY0 278 aaKnown RBP10□□□□□ -0.81
VIPAS39-201ENST00000327028 FAM86C2PA6NEL3 165 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 SRRM3A6NNA2 597 aaPredicted RBP10□□□□□ -0.81
VIPAS39-201ENST00000327028 ARHGEF33A8MVX0 844 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 PRR5-ARHGAP8B1AHC4 643 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 STX16-NPEPL1H3BU86 382 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 STX16O14662 325 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 SNX2O60749 519 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 GRK2P25098 689 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 ALDH18A1P54886 795 aaKnown RBP10□□□□□ -0.81
VIPAS39-201ENST00000327028 AP1S2P56377 157 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 C21orf59P57076 290 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 TEAD4Q15561 434 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 EEF1AKMT2Q5JPI9 291 aaKnown RBP10□□□□□ -0.81
VIPAS39-201ENST00000327028 ATG16L1Q676U5 607 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 CAPRIN2Q6IMN6 1127 aaKnown RBP10□□□□□ -0.81
VIPAS39-201ENST00000327028 RAB44Q7Z6P3 723 aaPredicted RBP10□□□□□ -0.81
VIPAS39-201ENST00000327028 CFAP61Q8NHU2 1237 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 SKA1Q96BD8 255 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 L3HYPDHQ96EM0 354 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 TMEM237Q96Q45 408 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 C11orf16Q9NQ32 467 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 UTP6Q9NYH9 597 aaKnown RBP10□□□□□ -0.81
VIPAS39-201ENST00000327028 KLF15Q9UIH9 416 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 PCDHGA2Q9Y5H1 932 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 ST14Q9Y5Y6 855 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 GON4LQ3T8J9 2241 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 ATXN2Q99700 1313 aaKnown RBP10□□□□□ -0.81
VIPAS39-201ENST00000327028 MUC3AQ02505 3323 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 A0A1B0GTW7 788 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 TCP11X1B4DZS4 312 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 IFRD1O00458 451 aaPredicted RBP10□□□□□ -0.81
VIPAS39-201ENST00000327028 NME1P15531 152 aaKnown RBP10□□□□□ -0.81
VIPAS39-201ENST00000327028 MAP4P27816 1152 aaKnown RBP10□□□□□ -0.81
VIPAS39-201ENST00000327028 BDKRB1P46663 353 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 NUBP1P53384 320 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 ILF3Q12906 894 aaKnown RBP eCLIP10□□□□□ -0.81
VIPAS39-201ENST00000327028 SETDB1Q15047 1291 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 PFKFB4Q16877 469 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 WASH2PQ6VEQ5 465 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 ZCCHC23Q6ZST2 131 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 NRROSQ86YC3 692 aa10□□□□□ -0.81
VIPAS39-201ENST00000327028 MCOLN3Q8TDD5 553 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms