RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ADAM12O43184 909 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 NTRK1P04629 796 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 BMP1P13497 986 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 TPP2P29144 1249 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 HALP42357 657 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 PTGER3P43115 390 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 ARHGDIAP52565 204 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 MGAT3Q09327 533 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 PWP1Q13610 501 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 SETMARQ53H47 684 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 EGFLAMQ63HQ2 1017 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 C8orf82Q6P1X6 216 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 UTS2BQ765I0 119 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 HS6ST3Q8IZP7 471 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 ATG16L2Q8NAA4 619 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 SMYD1Q8NB12 490 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 CNIH3Q8TBE1 160 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 TPD52L3Q96J77 140 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 APOLD1Q96LR9 279 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 ZNF382Q96SR6 550 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 FEM1AQ9BSK4 669 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 NUDT4Q9NZJ9 180 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 PNMA8BQ9ULN7 279 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 PCDHB3Q9Y5E6 796 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 PCDHGA8Q9Y5G5 932 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 PCDHGA11Q9Y5H2 935 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 SH3PXD2BA1X283 911 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 PRRG1O14668 218 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 CLDN7O95471 211 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 PGRP06401 933 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 CKBP12277 381 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 MSH3P20585 1137 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 ITPKAP23677 461 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 HLCSP50747 726 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 FCGRTP55899 365 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 NFATC3Q12968 1075 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 ZNF773Q6PK81 442 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 ZNF621Q6ZSS3 439 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 SPRED1Q7Z699 444 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 ADCK1Q86TW2 530 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 SNX19Q92543 992 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 KCNJ9Q92806 393 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 TUBA8Q9NY65 449 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 IGLV3-10A0A075B6K4 115 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 A0A1B0GVM2 712 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 MANSC4A6NHS7 340 aaPredicted RBP12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 DRGXA6NNA5 263 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 PRLP01236 227 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 SLC11A1P49279 550 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 BMXP51813 675 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 KPNA1P52294 538 aaPredicted RBP12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 CASP9P55211 416 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 TAS1R1Q7RTX1 841 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 RNF180Q86T96 592 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 TMEM173Q86WV6 379 aaPredicted RBP12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 ATG10Q9H0Y0 220 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 MUC13Q9H3R2 512 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 IKZF5Q9H5V7 419 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 ZFYVE1Q9HBF4 777 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 ARIH1Q9Y4X5 557 aaPredicted RBP12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 TCRBV5S2A0A599 114 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 OR6C75A6NL08 312 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 FAM155AB1AL88 458 aaPredicted RBP12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 K7EPI3 171 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 COCHO43405 550 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 MITFO75030 526 aaPredicted RBP12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 PIGAP37287 484 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 DSC3Q14574 896 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 ZCCHC8Q6NZY4 707 aaKnown RBP12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 TRIM74Q86UV6 250 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 TRIM73Q86UV7 250 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 HORMAD1Q86X24 394 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 ADHFE1Q8IWW8 467 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 SLC15A4Q8N697 577 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 DUS3LQ96G46 650 aaKnown RBP12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 MYO19Q96H55 970 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 C3orf18Q9UK00 162 aa12.65□□□□□ -0.38
HMGCS1-201ENST00000325110 EVPLLA8MZ36 301 aa12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 TULP3O75386 442 aa12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 MTX2O75431 263 aa12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 GLUD1P00367 558 aa12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 KLKB1P03952 638 aa12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 ABCB1P08183 1280 aaPredicted RBP12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 FAM189BP81408 668 aa12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 ACVR1Q04771 509 aa12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 BCL2L1Q07817 233 aa12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 ANKS3Q6ZW76 656 aa12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 GALNT7Q86SF2 657 aa12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 RGL4Q8IZJ4 473 aa12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 STK40Q8N2I9 435 aa12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 LKAAEAR1Q8TD35 194 aa12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 LZICQ8WZA0 190 aa12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 COQ6Q9Y2Z9 468 aa12.65□□□□□ -0.39
HMGCS1-201ENST00000325110 RALGAPA2Q2PPJ7 1873 aa12.64□□□□□ -0.39
HMGCS1-201ENST00000325110 C2orf78A6NCI8 922 aa12.64□□□□□ -0.39
HMGCS1-201ENST00000325110 KDELR3O43731 214 aa12.64□□□□□ -0.39
HMGCS1-201ENST00000325110 FADS2O95864 444 aaKnown RBP12.64□□□□□ -0.39
HMGCS1-201ENST00000325110 KRT6AP02538 564 aa12.64□□□□□ -0.39
HMGCS1-201ENST00000325110 KRT6BP04259 564 aa12.64□□□□□ -0.39
HMGCS1-201ENST00000325110 HIST1H2AGP0C0S8 130 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms