RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CCR7P32248 378 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 CBSP35520 551 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 CTSCP53634 463 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 INHBCP55103 352 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 HPCAP84074 193 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 ZXDAP98168 799 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 TTLL9Q3SXZ7 439 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 ZNF648Q5T619 568 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-202ENST00000324340 B3GNT6Q6ZMB0 384 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 MAMSTRQ6ZN01 415 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 OTOAQ7RTW8 1153 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 FAM124AQ86V42 546 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 HEATR4Q86WZ0 1026 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 NUDCD3Q8IVD9 361 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 EEF1AKMT1Q8WVE0 214 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 ZNF75CPQ92670 426 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-202ENST00000324340 PTERQ96BW5 349 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 SGF29Q96ES7 293 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 LINGO1Q96FE5 620 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 ZNF514Q96K75 400 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-202ENST00000324340 SCYL1Q96KG9 808 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 LINC00615Q96LM1 132 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-202ENST00000324340 MECRQ9BV79 373 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 C1orf21Q9H246 121 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 SARS2Q9NP81 518 aaKnown RBP12.52□□□□□ -0.41
DDX39A-202ENST00000324340 NDE1Q9NXR1 346 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 PAIP2BQ9ULR5 123 aaKnown RBP12.52□□□□□ -0.41
DDX39A-202ENST00000324340 GPR34Q9UPC5 381 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 SH3GLB1Q9Y371 365 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 PIKFYVEQ9Y2I7 2098 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 RAD51BO15315 384 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 KERAO60938 352 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 ZNF217O75362 1048 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 CDK14O94921 469 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 CBX6O95503 412 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 APBB3O95704 486 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 SEMA4FO95754 770 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 HOXC4P09017 264 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-202ENST00000324340 GSTM1P09488 218 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 MYL2P10916 166 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 FGF3P11487 239 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-202ENST00000324340 ENO3P13929 434 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-202ENST00000324340 ITGB6P18564 788 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 IGFALSP35858 605 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 KCNC1P48547 511 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 RGS4P49798 205 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 PRKAA2P54646 552 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 GSTM4Q03013 218 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 INPP5AQ14642 412 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 OR4D1Q15615 310 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 ZNF658BQ4V348 819 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-202ENST00000324340 PLEKHS1Q5SXH7 462 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 FAM47EQ6ZV65 393 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 DET1Q7L5Y6 550 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 C10orf107Q8IVU9 208 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 PGBD3Q8N328 593 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 CAMKK1Q8N5S9 505 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 JADE3Q92613 823 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 SKA1Q96BD8 255 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 HHIPQ96QV1 700 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 ATOH8Q96SQ7 321 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 SLX1AQ9BQ83 275 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 CCM2Q9BSQ5 444 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 ALG9Q9H6U8 611 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 OXSMQ9NWU1 459 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 WSB2Q9NYS7 404 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-202ENST00000324340 IKZF3Q9UKT9 509 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 PADI4Q9UM07 663 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 SIT1Q9Y3P8 196 aa12.51□□□□□ -0.41
DDX39A-202ENST00000324340 C17orf113A0A1B0GUU1 675 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 ARHGAP10A1A4S6 786 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 PRR23AA6NEV1 266 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 OR2AG2A6NM03 316 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 NUAK1O60285 661 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 DLX3O60479 287 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 TRIM13O60858 407 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 GPC4O75487 556 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 ESRRAP11474 423 aaPredicted RBP12.5□□□□□ -0.41
DDX39A-202ENST00000324340 MYCLP1P12525 358 aaPredicted RBP12.5□□□□□ -0.41
DDX39A-202ENST00000324340 MTHFD2P13995 350 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 ZNF8P17098 575 aaPredicted RBP12.5□□□□□ -0.41
DDX39A-202ENST00000324340 BGNP21810 368 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 KCNA4P22459 653 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 ATP5F1P24539 256 aaPredicted RBP12.5□□□□□ -0.41
DDX39A-202ENST00000324340 RPL5P46777 297 aaKnown RBP12.5□□□□□ -0.41
DDX39A-202ENST00000324340 CCR5P51681 352 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 ACTR3P61158 418 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 NFKB2Q00653 900 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 SF3A3Q12874 501 aaKnown RBP eCLIP12.5□□□□□ -0.414e-6■■■■■ 26.8
DDX39A-202ENST00000324340 MTAPQ13126 283 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 MED21Q13503 144 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 GTF2H3Q13889 308 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 CHI3L2Q15782 390 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 TMEM220Q6QAJ8 160 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 CYHR1Q6ZMK1 362 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 NEK10Q6ZWH5 1172 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 ZNF547Q8IVP9 402 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 STAG3L4Q8TBR4 150 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 WDR60Q8WVS4 1066 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 KLK6Q92876 244 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms