RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 COX18Q8N8Q8 333 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 TRPM4Q8TD43 1214 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 LRRC4CQ9HCJ2 640 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 DUS2Q9NX74 493 aaKnown RBP12.44□□□□□ -0.42
FN1-201ENST00000323926 TCAF1Q9Y4C2 921 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 PCDHB11Q9Y5F2 797 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 FADS3Q9Y5Q0 445 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 NPC1O15118 1278 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 VEGFDO43915 354 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 EDF1O60869 148 aaKnown RBP12.44□□□□□ -0.42
FN1-201ENST00000323926 CDKN2BP42772 138 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 HERVK_113P63132 956 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 CCNIQ14094 377 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 LRRC32Q14392 662 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.44□□□□□ -0.42
FN1-201ENST00000323926 SPAG16Q8N0X2 631 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 IL31RAQ8NI17 732 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 ERVK-6Q9BXR3 956 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 MS4A12Q9NXJ0 267 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 LINC00854A0A1B0GVQ3 168 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 H0Y858 1186 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 TSPAN9O75954 239 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 SNHG28P0DPA3 235 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 CRISP3P54108 245 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 CASP7P55210 303 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 MOCS1Q9NZB8 636 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 ZIM2Q9NZV7 527 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 SPTBN1Q01082 2364 aaKnown RBP12.44□□□□□ -0.42
FN1-201ENST00000323926 KCNU1A8MYU2 1149 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 NME6O75414 186 aaPredicted RBP12.44□□□□□ -0.42
FN1-201ENST00000323926 IL7RP16871 459 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 RORCP51449 518 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 APLP1P51693 650 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 E2F2Q14209 437 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 TAF5Q15542 800 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 DET1Q7L5Y6 550 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 HNRNPABQ99729 332 aaKnown RBP12.44□□□□□ -0.42
FN1-201ENST00000323926 CHST7Q9NS84 486 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 CACNA1DQ01668 2161 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 PKD1L3Q7Z443 1732 aa12.44□□□□□ -0.42
FN1-201ENST00000323926 CBX6O95503 412 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 PTPN2P17706 415 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 OR1D2P34982 312 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 OR52K2Q8NGK3 314 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 IGSF9Q9P2J2 1179 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 P2RX2Q9UBL9 471 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 SEPT4O43236 478 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 PLEKHN1Q494U1 663 aaPredicted RBP12.43□□□□□ -0.42
FN1-201ENST00000323926 CLNKQ7Z7G1 428 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 GPR156Q8NFN8 814 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 CYP2W1Q8TAV3 490 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 TWIST2Q8WVJ9 160 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 KLHL6Q8WZ60 621 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 TESCQ96BS2 214 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 NXPE2Q96DL1 559 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 AP4B1Q9Y6B7 739 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 SCN4AP35499 1836 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 PDPK1O15530 556 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 RAP2AP10114 183 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 GABRR2P28476 465 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 SWT1Q5T5J6 900 aaKnown RBP12.43□□□□□ -0.42
FN1-201ENST00000323926 MTFMTQ96DP5 389 aaKnown RBP12.43□□□□□ -0.42
FN1-201ENST00000323926 TIMM13Q9Y5L4 95 aaPredicted RBP12.43□□□□□ -0.42
FN1-201ENST00000323926 ATAD5Q96QE3 1844 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 RHPN2P1A8MT19 583 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 TNFRSF11BO00300 401 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 ANGPTL1O95841 491 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 EPCAMP16422 314 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 AGXTP21549 392 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 TRIM32Q13049 653 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 C16orf59Q7L2K0 433 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 PHF12Q96QT6 1004 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 TFB2MQ9H5Q4 396 aaKnown RBP12.43□□□□□ -0.42
FN1-201ENST00000323926 IMP3Q9NV31 184 aaKnown RBP12.43□□□□□ -0.42
FN1-201ENST00000323926 POLR3HQ9Y535 204 aaPredicted RBP12.43□□□□□ -0.42
FN1-201ENST00000323926 FFAR3O14843 346 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 GPR42O15529 346 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 DNAJA1P31689 397 aaKnown RBP12.43□□□□□ -0.42
FN1-201ENST00000323926 ACTR1BP42025 376 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 SP140Q13342 867 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 SGCDQ92629 289 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 ZNF358Q9NW07 568 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 CHD5Q8TDI0 1954 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 CCNB2O95067 398 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 PFKLP17858 780 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 ZNF132P52740 706 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 GBX2P52951 348 aaPredicted RBP12.43□□□□□ -0.42
FN1-201ENST00000323926 ERVK-8P63133 956 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 SP2Q02086 613 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 ULK3Q6PHR2 472 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 MBOAT1Q6ZNC8 495 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 TMCO2Q7Z6W1 182 aaPredicted RBP12.43□□□□□ -0.42
FN1-201ENST00000323926 ZNF567Q8N184 647 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 LCN9Q8WX39 176 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 OVCA2Q8WZ82 227 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 TUBA1CQ9BQE3 449 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 OGDHLQ9ULD0 1010 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 CHKBQ9Y259 395 aa12.43□□□□□ -0.42
FN1-201ENST00000323926 MAFBQ9Y5Q3 323 aaPredicted RBP12.43□□□□□ -0.42
FN1-201ENST00000323926 EPOP01588 193 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms