RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 CACNG1Q06432 222 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 MED22Q15528 200 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 ARHGAP12Q8IWW6 846 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 UMODL1-AS1Q8N2C9 162 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 ZMIZ2Q8NF64 920 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 COPS4Q9BT78 406 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 ERGIC3Q9Y282 383 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 SOCS7O14512 581 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 CLDN11O75508 207 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 HPRP00739 348 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 EPOP01588 193 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 PGRP06401 933 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 GJA8P48165 433 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 PDZK1Q5T2W1 519 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 ERICH5Q6P6B1 374 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 DOK6Q6PKX4 331 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 PAQR9Q6ZVX9 377 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 TMEM40Q8WWA1 233 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 DCSTAMPQ9H295 470 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 SH3BP1Q9Y3L3 701 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 PCDHB7Q9Y5E2 793 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 DCKP27707 260 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 PLA2G16P53816 162 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 INHBEP58166 350 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 OLR1P78380 273 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 MS4A13Q5J8X5 152 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 NEK10Q6ZWH5 1172 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 ZNF467Q7Z7K2 595 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 FAR1Q8WVX9 515 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 GPR78Q96P69 363 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 CYP2S1Q96SQ9 504 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 ZNF382Q96SR6 550 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 CENPXA8MT69 81 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 LOC110117498-PIK3R3F6TDL0 507 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 CD1EP15812 388 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 MVKQ03426 396 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 ELAVL2Q12926 359 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 HIST2H2ACQ16777 129 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 PLEKHG6Q3KR16 790 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 COLEC12Q5KU26 742 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 HECTD3Q5T447 861 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 HIST2H2AA3Q6FI13 130 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 ANKRD26P1Q6NSI1 321 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 FUNDC1Q8IVP5 155 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 ITPKCQ96DU7 683 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 MTERF3Q96E29 417 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 CHCHD6Q9BRQ6 235 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 AMBNQ9NP70 447 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 TMEM248Q9NWD8 314 aa12.53□□□□□ -0.4
DNMT3A-202ENST00000321117 H3BN98 237 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 FPGTO14772 594 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 DNAJB5O75953 348 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 PRAMEF1O95521 474 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 FYNP06241 537 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 HPCAL1P37235 193 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 OPRL1P41146 370 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 GPR15P49685 360 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 RCAN2Q14206 197 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 NCF4Q15080 339 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 C9orf131Q5VYM1 1079 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 KDELC1Q6UW63 502 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 LINGO4Q6UY18 593 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 LYSMD3Q7Z3D4 306 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 ZFAND4Q86XD8 727 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 ARMC8Q8IUR7 673 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 ST13P5Q8NFI4 369 aaPredicted RBP12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 OR8J3Q8NGG0 315 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 OR6K2Q8NGY2 324 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 TBC1D15Q8TC07 691 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 PEX13Q92968 403 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 VPS35Q96QK1 796 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 MAP10Q9P2G4 905 aa12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 WBP11Q9Y2W2 641 aaKnown RBP12.52□□□□□ -0.4
DNMT3A-202ENST00000321117 PRPS2P11908 318 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 HUNKP57058 714 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 SPIBQ01892 262 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 SEMA3BQ13214 749 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 IL18R1Q13478 541 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 PTGR1Q14914 329 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 LAPTM4AQ15012 233 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 OR2T5Q6IEZ7 315 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 MAMDC4Q6UXC1 1216 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 GOLGA7Q7Z5G4 137 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 IGFN1Q86VF2 1251 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 TICAM1Q8IUC6 712 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 OR2T29Q8NH02 315 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 CNIH3Q8TBE1 160 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 UBASH3BQ8TF42 649 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 SH3KBP1Q96B97 665 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 OTULINQ96BN8 352 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 UBXN10Q96LJ8 280 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 R3HDMLQ9H3Y0 253 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 TBKBP1A7MCY6 615 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 NBNO60934 754 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 CD47Q08722 323 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 PHKG1Q16816 387 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 FAM110CQ1W6H9 321 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 GPR153Q6NV75 609 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 CASP12Q6UXS9 341 aa12.52□□□□□ -0.41
DNMT3A-202ENST00000321117 SERPINA9Q86WD7 417 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms