RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 MFSD1Q9H3U5 465 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 RNF11Q9Y3C5 154 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 YIPF1Q9Y548 306 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 GSAPA4D1B5 854 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 CHRNA1P02708 482 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 PROZP22891 400 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 HMGN2P46Q86SG4 172 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 TMEM135Q86UB9 458 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 MCFD2Q8NI22 146 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 SH3RF2Q8TEC5 729 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 ASB9Q96DX5 294 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 NENFQ9UMX5 172 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 PCDHB1Q9Y5F3 818 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 SEC16AO15027 2179 aa16.21■□□□□ 0.19
CLIP4-201ENST00000320081 KPNA4O00629 521 aaPredicted RBP16.21■□□□□ 0.18
CLIP4-201ENST00000320081 SYN3O14994 580 aa16.21■□□□□ 0.18
CLIP4-201ENST00000320081 PER2O15055 1255 aa16.21■□□□□ 0.18
CLIP4-201ENST00000320081 MEF2AQ02078 507 aaPredicted RBP16.21■□□□□ 0.18
CLIP4-201ENST00000320081 PTPRRQ15256 657 aa16.21■□□□□ 0.18
CLIP4-201ENST00000320081 TAF1AQ15573 450 aaPredicted RBP16.21■□□□□ 0.18
CLIP4-201ENST00000320081 SF1Q15637 639 aaKnown RBP16.21■□□□□ 0.18
CLIP4-201ENST00000320081 ZNF648Q5T619 568 aaPredicted RBP16.21■□□□□ 0.18
CLIP4-201ENST00000320081 C9orf64Q5T6V5 341 aa16.21■□□□□ 0.18
CLIP4-201ENST00000320081 INTS11Q5TA45 600 aaKnown RBP16.21■□□□□ 0.18
CLIP4-201ENST00000320081 FAM180BQ6P0A1 224 aa16.21■□□□□ 0.18
CLIP4-201ENST00000320081 ASRGL1Q7L266 308 aa16.21■□□□□ 0.18
CLIP4-201ENST00000320081 GET4Q7L5D6 327 aaPredicted RBP16.21■□□□□ 0.18
CLIP4-201ENST00000320081 KCT2Q8NC54 265 aa16.21■□□□□ 0.18
CLIP4-201ENST00000320081 FUBP3Q96I24 572 aaKnown RBP eCLIP16.21■□□□□ 0.18
CLIP4-201ENST00000320081 OR2AG1Q9H205 316 aa16.21■□□□□ 0.18
CLIP4-201ENST00000320081 VRTNQ9H8Y1 702 aa16.21■□□□□ 0.18
CLIP4-201ENST00000320081 C1orf109Q9NX04 203 aa16.21■□□□□ 0.18
CLIP4-201ENST00000320081 ARIH1Q9Y4X5 557 aaPredicted RBP16.21■□□□□ 0.18
CLIP4-201ENST00000320081 SMCHD1A6NHR9 2005 aa16.21■□□□□ 0.18
CLIP4-201ENST00000320081 SMIM30A4D0T7 59 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 MAFKO60675 156 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 KRT20P35900 424 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 CDC42P60953 191 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 PTSQ03393 145 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 PSRC1Q6PGN9 363 aaPredicted RBP16.2■□□□□ 0.18
CLIP4-201ENST00000320081 PTCHD4Q6ZW05 846 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 CYP2U1Q7Z449 544 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 SMYD1Q8NB12 490 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 SPACA7Q96KW9 195 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 CA12O43570 354 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 SLC7A1P30825 629 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 PREPP48147 710 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 TGFBIQ15582 683 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 PSAPL1Q6NUJ1 521 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 Q6ZVL8 140 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 CHMP1BQ7LBR1 199 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 TDRD1Q9BXT4 1180 aaKnown RBP16.2■□□□□ 0.18
CLIP4-201ENST00000320081 ZC4H2Q9NQZ6 224 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 DEC1Q9P2X7 70 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 NWD2Q9ULI1 1742 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 CACNA1SQ13698 1873 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 A0A1W2PPW3 197 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 ZBTB42B2RXF5 422 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 GABRDO14764 452 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 SGTAO43765 313 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 PSMD8P48556 350 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 STC1P52823 247 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 MTTPP55157 894 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 ERVK-8P63133 956 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 NFKB2Q00653 900 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 MS4A2Q01362 244 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 DPYSQ14117 519 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 MPPE1Q53F39 396 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 CCNYL2Q5T2Q4 361 aa16.2■□□□□ 0.18
CLIP4-201ENST00000320081 ZCWPW2A0A1B0GU75 182 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 CCNIQ14094 377 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 ZSWIM7Q19AV6 140 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 PTCHD3Q3KNS1 767 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 KLHDC10Q6PID8 442 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 SUSD1Q6UWL2 747 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 C16orf62Q7Z3J2 963 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 SORCS1Q8WY21 1168 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 TMBIM1Q969X1 311 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 HSPBAP1Q96EW2 488 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 NODALQ96S42 347 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 CGREF1Q99674 301 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 PLGRKTQ9HBL7 147 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 WNT6Q9Y6F9 365 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 SPTBN2O15020 2390 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 HAS3O00219 553 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 PGLSO95336 258 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 TFPTP0C1Z6 253 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 KCNA5P22460 613 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 C1QTNF8P60827 252 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 XIAPP98170 497 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 TAB1Q15750 504 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 KRT73Q86Y46 540 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 DPP10Q8N608 796 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 ARNTL2Q8WYA1 636 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 REPS1Q96D71 796 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 IL4I1Q96RQ9 567 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 MTMR10Q9NXD2 777 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 ZNF451Q9Y4E5 1061 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 SPACA6W5XKT8 324 aa16.19■□□□□ 0.18
CLIP4-201ENST00000320081 TNFRSF21O75509 655 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms