RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 HMGCS1Q01581 520 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 CLCA4Q14CN2 919 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 HIST2H2ACQ16777 129 aaPredicted RBP10.96□□□□□ -0.65
PTPN7-201ENST00000309017 C18orf21Q32NC0 220 aaPredicted RBP10.96□□□□□ -0.65
PTPN7-201ENST00000309017 SPANXN4Q5MJ08 99 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 ATAD3BQ5T9A4 648 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 CACHD1Q5VU97 1274 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 ANKRD46Q86W74 232 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 MTFMTQ96DP5 389 aaKnown RBP10.96□□□□□ -0.65
PTPN7-201ENST00000309017 LGALS12Q96DT0 336 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 CCDC97Q96F63 343 aaPredicted RBP10.96□□□□□ -0.65
PTPN7-201ENST00000309017 CYP2S1Q96SQ9 504 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 MYOCQ99972 504 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 NECTIN3Q9NQS3 549 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 ZNF225Q9UK10 706 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 C2orf81A6NN90 581 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 FZD9O00144 591 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 MFN2O95140 757 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 PGLSO95336 258 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 SNAI1O95863 264 aaPredicted RBP10.96□□□□□ -0.65
PTPN7-201ENST00000309017 ATXN1LP0C7T5 689 aaKnown RBP10.96□□□□□ -0.65
PTPN7-201ENST00000309017 MYCLP1P12525 358 aaPredicted RBP10.96□□□□□ -0.65
PTPN7-201ENST00000309017 PKMP14618 531 aaKnown RBP10.96□□□□□ -0.65
PTPN7-201ENST00000309017 RHOQP17081 205 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 PFKLP17858 780 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 CD40LGP29965 261 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 ACVRL1P37023 503 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 CDKN1CP49918 316 aaPredicted RBP10.96□□□□□ -0.65
PTPN7-201ENST00000309017 MRPS15P82914 257 aaKnown RBP10.96□□□□□ -0.65
PTPN7-201ENST00000309017 XKR7Q5GH72 579 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 GALNT7Q86SF2 657 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 DCP2Q8IU60 420 aaKnown RBP10.96□□□□□ -0.65
PTPN7-201ENST00000309017 PROX1Q92786 737 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 REXO4Q9GZR2 422 aaKnown RBP10.96□□□□□ -0.65
PTPN7-201ENST00000309017 DCSTAMPQ9H295 470 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 DSN1Q9H410 356 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 MARCH7Q9H992 704 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 MIOSQ9NXC5 875 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 NEU3Q9UQ49 428 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 IQCF5A8MTL0 148 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 STX16O14662 325 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 AXIN1O15169 862 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 OR1I1O60431 355 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 DNAJB5O75953 348 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 SCELO95171 688 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 APOA1P02647 267 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 MMP2P08253 660 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 TGM1P22735 817 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 COPZ1P61923 177 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 SMN1Q16637 294 aaKnown RBP10.96□□□□□ -0.66
PTPN7-201ENST00000309017 ZNF691Q5VV52 312 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 ZDHHC21Q8IVQ6 265 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 DPP10Q8N608 796 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 LPCAT1Q8NF37 534 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 OR4F6Q8NGB9 312 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 CDC26Q8NHZ8 85 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 POPDC3Q9HBV1 291 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 FAM105AQ9NUU6 356 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 TTC3P53804 2025 aa10.96□□□□□ -0.66
PTPN7-201ENST00000309017 CREG1O75629 220 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 ALDH7A1P49419 539 aaKnown RBP10.95□□□□□ -0.66
PTPN7-201ENST00000309017 SELENBP1Q13228 472 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 PON2Q15165 354 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 CATSPEREQ5SY80 951 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 AFTPHQ6ULP2 937 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 TMEM179BQ7Z7N9 219 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 OR8J3Q8NGG0 315 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 CDCA5Q96FF9 252 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 VMP1Q96GC9 406 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 TSPAN18Q96SJ8 248 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 RHNO1Q9BSD3 238 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 ABCG8Q9H221 673 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 IPPKQ9H8X2 491 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 PCDHB14Q9Y5E9 798 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 hCG_2039718K7EN88 272 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 STX7O15400 261 aaKnown RBP10.95□□□□□ -0.66
PTPN7-201ENST00000309017 TBX18O95935 607 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 GTF2E2P29084 291 aaKnown RBP10.95□□□□□ -0.66
PTPN7-201ENST00000309017 HSPA7P48741 367 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 NEK2P51955 445 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 PPP5CP53041 499 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 CRYBB1P53674 252 aaPredicted RBP10.95□□□□□ -0.66
PTPN7-201ENST00000309017 BEX3Q00994 111 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 TIAL1Q01085 375 aaKnown RBP eCLIP10.95□□□□□ -0.66
PTPN7-201ENST00000309017 ABRAXAS2Q15018 415 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 ACOX1Q15067 660 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 ZNF792Q3KQV3 632 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 XKR4Q5GH76 650 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 LIX1Q8N485 282 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 ATP6V0D2Q8N8Y2 350 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 GPR152Q8TDT2 470 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 PPP3R2Q96LZ3 170 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 ZNF641Q96N77 438 aaPredicted RBP10.95□□□□□ -0.66
PTPN7-201ENST00000309017 ABHD16BQ9H3Z7 469 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 AMBNQ9NP70 447 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 PKP3Q9Y446 797 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 A0A0G2JMZ2 1700 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 LRRC37A2A6NM11 1700 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 WISP3O95389 354 aaPredicted RBP10.95□□□□□ -0.66
PTPN7-201ENST00000309017 LCKP06239 509 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms