RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 MAPKAPK3Q16644 382 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 PARP15Q460N3 678 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 CTXN3Q4LDR2 81 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 LAIR1Q6GTX8 287 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 FAM151BQ6UXP7 276 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 NKAPQ8N5F7 415 aaKnown RBP16.3■□□□□ 0.2
SSH3-201ENST00000308127 NETO1Q8TDF5 533 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 RAB2BQ8WUD1 216 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 FKBP10Q96AY3 582 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 NRBF2Q96F24 287 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 RIBC2Q9H4K1 309 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 PDFQ9HBH1 243 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 ELOVL2Q9NXB9 296 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 AFF4Q9UHB7 1163 aaKnown RBP16.3■□□□□ 0.2
SSH3-201ENST00000308127 KRBA1A5PL33 1030 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 A8MU76 341 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 MYO1GB0I1T2 1018 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 ANKRD28O15084 1053 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 SERPINA1P01009 418 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 MAGP20916 626 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 EPHA2P29317 976 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 PWP1Q13610 501 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 VARS2Q5ST30 1063 aaKnown RBP16.29■□□□□ 0.2
SSH3-201ENST00000308127 GOLM1Q8NBJ4 401 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 RPL3LQ92901 407 aaKnown RBP16.29■□□□□ 0.2
SSH3-201ENST00000308127 GLMNQ92990 594 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 NUSAP1Q9BXS6 441 aaKnown RBP16.29■□□□□ 0.2
SSH3-201ENST00000308127 UBA2Q9UBT2 640 aaPredicted RBP16.29■□□□□ 0.2
SSH3-201ENST00000308127 SNX5Q9Y5X3 404 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 FAM92AA1XBS5 289 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 F5H5T6 163 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 SLC1A7O00341 560 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 CXCR6O00574 342 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 SEC22BO75396 215 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 ZNF682O95780 498 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 ZNF12P17014 697 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 GKP32189 559 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 TRIP4Q15650 581 aaPredicted RBP16.29■□□□□ 0.2
SSH3-201ENST00000308127 PHKG1Q16816 387 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 PAGE2BQ5JRK9 111 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 ATXN7L2Q5T6C5 722 aaPredicted RBP16.29■□□□□ 0.2
SSH3-201ENST00000308127 FAM171A1Q5VUB5 890 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 SUSD1Q6UWL2 747 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 RSPO2Q6UXX9 243 aaPredicted RBP16.29■□□□□ 0.2
SSH3-201ENST00000308127 MRPL10Q7Z7H8 261 aaKnown RBP16.29■□□□□ 0.2
SSH3-201ENST00000308127 DSG4Q86SJ6 1040 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 CHPT1Q8WUD6 406 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 GTF2H4Q92759 462 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 POPDC3Q9HBV1 291 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 RASSF1Q9NS23 344 aa16.29■□□□□ 0.2
SSH3-201ENST00000308127 LOC100130705A0A1B0GUX0 176 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 A0A1W2PQ67 120 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 STX16O14662 325 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 INSIG1O15503 277 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 GJB5O95377 273 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 C7P10643 843 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 HALP42357 657 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 GATMP50440 423 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 NCS1P62166 190 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 DUSP4Q13115 394 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 SKIV2LQ15477 1246 aaKnown RBP16.28■□□□□ 0.2
SSH3-201ENST00000308127 USP50Q70EL3 339 aaPredicted RBP16.28■□□□□ 0.2
SSH3-201ENST00000308127 RNF175Q8N4F7 328 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 PSD4Q8NDX1 1056 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 ZNF548Q8NEK5 533 aaPredicted RBP16.28■□□□□ 0.2
SSH3-201ENST00000308127 SH3YL1Q96HL8 342 aaPredicted RBP16.28■□□□□ 0.2
SSH3-201ENST00000308127 NODALQ96S42 347 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 INPP5KQ9BT40 448 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 OSBPL10Q9BXB5 764 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 TRIM17Q9Y577 477 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 ANGPTL3Q9Y5C1 460 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 PCDHB9Q9Y5E1 797 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 DICER1Q9UPY3 1922 aaKnown RBP16.28■□□□□ 0.2
SSH3-201ENST00000308127 LPOP22079 712 aaPredicted RBP16.28■□□□□ 0.2
SSH3-201ENST00000308127 HOXC8P31273 242 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 HPCAL1P37235 193 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 NEK2P51955 445 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 OXCT1P55809 520 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 FAM189BP81408 668 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 PON2Q15165 354 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 PRR23BQ6ZRT6 265 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 NECAB2Q7Z6G3 386 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 EID2BQ96D98 161 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 ZNF382Q96SR6 550 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 TM6SF2Q9BZW4 377 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 CIPCQ9C0C6 399 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 MIR1-1HGQ9H1L0 117 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 FBXO44Q9H4M3 255 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 AGO1Q9UL18 857 aaKnown RBP16.28■□□□□ 0.2
SSH3-201ENST00000308127 FADS2O95864 444 aaKnown RBP16.28■□□□□ 0.2
SSH3-201ENST00000308127 PSMB9P28065 219 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 GSTM2P28161 218 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 DCTP40126 519 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 PPP2R2BQ00005 443 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 EMX1Q04741 257 aaPredicted RBP16.28■□□□□ 0.2
SSH3-201ENST00000308127 CPSF6Q16630 551 aaKnown RBP eCLIP16.28■□□□□ 0.2
SSH3-201ENST00000308127 SERINC5Q86VE9 423 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 TRUB1Q8WWH5 349 aaKnown RBP16.28■□□□□ 0.2
SSH3-201ENST00000308127 TSSK3Q96PN8 268 aa16.28■□□□□ 0.2
SSH3-201ENST00000308127 DPY30Q9C005 99 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms