RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 CAPRIN2Q6IMN6 1127 aaKnown RBP26.52■■□□□ 1.84
HDAC3-201ENST00000305264 ABRAXAS1Q6UWZ7 409 aa26.52■■□□□ 1.84
HDAC3-201ENST00000305264 WASH2PQ6VEQ5 465 aa26.52■■□□□ 1.84
HDAC3-201ENST00000305264 CYHR1Q6ZMK1 362 aa26.52■■□□□ 1.84
HDAC3-201ENST00000305264 PLD6Q8N2A8 252 aaKnown RBP26.52■■□□□ 1.84
HDAC3-201ENST00000305264 WASH6PQ9NQA3 447 aa26.52■■□□□ 1.84
HDAC3-201ENST00000305264 IGSF5Q9NSI5 407 aa26.52■■□□□ 1.84
HDAC3-201ENST00000305264 KRT4P19013 534 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 ABRQ12979 859 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 DUS1LQ6P1R4 473 aaKnown RBP26.51■■□□□ 1.83
HDAC3-201ENST00000305264 MYO1HQ8N1T3 1032 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 SDR16C5Q8N3Y7 309 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 ACMSDQ8TDX5 336 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 INSM2Q96T92 566 aaPredicted RBP26.51■■□□□ 1.83
HDAC3-201ENST00000305264 SH3GL2Q99962 352 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 CCNFP41002 786 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 NEK10Q6ZWH5 1172 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 CCDC91Q7Z6B0 441 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 CLEC14AQ86T13 490 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 NAGSQ8N159 534 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 CFAP61Q8NHU2 1237 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 ZDHHC1Q8WTX9 485 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 ARL8AQ96BM9 186 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 NXNL1Q96CM4 212 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 CABS1Q96KC9 395 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 C12orf66Q96MD2 445 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 EDEM2Q9BV94 578 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 DERL2Q9GZP9 239 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 ZNF358Q9NW07 568 aa26.51■■□□□ 1.83
HDAC3-201ENST00000305264 MPC1LP0DKB6 136 aa26.5■■□□□ 1.83
HDAC3-201ENST00000305264 CD1DP15813 335 aa26.5■■□□□ 1.83
HDAC3-201ENST00000305264 ASCL5Q7RTU5 278 aa26.5■■□□□ 1.83
HDAC3-201ENST00000305264 PDLIM5Q96HC4 596 aaKnown RBP26.5■■□□□ 1.83
HDAC3-201ENST00000305264 SIRPGQ9P1W8 387 aa26.5■■□□□ 1.83
HDAC3-201ENST00000305264 ZNF292O60281 2723 aa26.5■■□□□ 1.83
HDAC3-201ENST00000305264 TRBV23OR9-2A0A075B6M9 112 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 NEMP2A6NFY4 417 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 IFRD1O00458 451 aaPredicted RBP26.49■■□□□ 1.83
HDAC3-201ENST00000305264 CDX4O14627 284 aaPredicted RBP26.49■■□□□ 1.83
HDAC3-201ENST00000305264 LTA4HP09960 611 aaKnown RBP26.49■■□□□ 1.83
HDAC3-201ENST00000305264 CREB1P16220 341 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 SLC26A3P40879 764 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 LRRC8EQ6NSJ5 796 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 IYDQ6PHW0 289 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 LVRNQ6Q4G3 990 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 PRR23CQ6ZRP0 262 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 IMP3Q9NV31 184 aaKnown RBP26.49■■□□□ 1.83
HDAC3-201ENST00000305264 DNAAF2Q9NVR5 837 aaKnown RBP26.49■■□□□ 1.83
HDAC3-201ENST00000305264 RIF1Q5UIP0 2472 aaKnown RBP26.49■■□□□ 1.83
HDAC3-201ENST00000305264 NPEPPSL1A6NEC2 478 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 ZBTB14O43829 449 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 PCDHGA12O60330 932 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 KLHL2O95198 593 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 MATN4O95460 622 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 HALP42357 657 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 RPE65Q16518 533 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 TFGQ92734 400 aaPredicted RBP26.49■■□□□ 1.83
HDAC3-201ENST00000305264 ADAMTS6Q9UKP5 1117 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 ANKRD12Q6UB98 2062 aa26.49■■□□□ 1.83
HDAC3-201ENST00000305264 GOLGA4Q13439 2230 aaKnown RBP26.48■■□□□ 1.83
HDAC3-201ENST00000305264 CDC7O00311 574 aa26.48■■□□□ 1.83
HDAC3-201ENST00000305264 EXOC3L1Q86VI1 746 aa26.48■■□□□ 1.83
HDAC3-201ENST00000305264 GPR78Q96P69 363 aa26.48■■□□□ 1.83
HDAC3-201ENST00000305264 ACBD3Q9H3P7 528 aa26.48■■□□□ 1.83
HDAC3-201ENST00000305264 NLGN3Q9NZ94 848 aa26.48■■□□□ 1.83
HDAC3-201ENST00000305264 ZNF624Q9P2J8 865 aaPredicted RBP26.48■■□□□ 1.83
HDAC3-201ENST00000305264 NOVA2Q9UNW9 492 aaKnown RBP26.48■■□□□ 1.83
HDAC3-201ENST00000305264 PRAMEF33A0A0G2JMD5 474 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 BTN3A1O00481 513 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 ZNF883P0CG24 379 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 GLRBP48167 497 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 SLC18A2Q05940 514 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 C6orf132Q5T0Z8 1188 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 SFRP1Q8N474 314 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 SLC37A2Q8TED4 501 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 ASB11Q8WXH4 323 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 PTERQ96BW5 349 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 ASF1AQ9Y294 204 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 TRIM38O00635 465 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 NOBOXO60393 691 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 MTHFD1P11586 935 aaKnown RBP26.47■■□□□ 1.83
HDAC3-201ENST00000305264 TSNQ15631 228 aaKnown RBP26.47■■□□□ 1.83
HDAC3-201ENST00000305264 FAM83EQ2M2I3 478 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 TTMPQ5BVD1 217 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 CDHR3Q6ZTQ4 885 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 PHC3Q8NDX5 983 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 OR5AR1Q8NGP9 310 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 DLG3Q92796 817 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 TLCD1Q96CP7 247 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 STMN4Q9H169 189 aaPredicted RBP26.47■■□□□ 1.83
HDAC3-201ENST00000305264 SENP1Q9P0U3 644 aa26.47■■□□□ 1.83
HDAC3-201ENST00000305264 OPA1O60313 960 aa26.46■■□□□ 1.83
HDAC3-201ENST00000305264 COL6A2P12110 1019 aa26.46■■□□□ 1.83
HDAC3-201ENST00000305264 BDKRB1P46663 353 aa26.46■■□□□ 1.83
HDAC3-201ENST00000305264 AASDHQ4L235 1098 aaPredicted RBP26.46■■□□□ 1.83
HDAC3-201ENST00000305264 RASGRP3Q8IV61 690 aa26.46■■□□□ 1.83
HDAC3-201ENST00000305264 KYQ8NBH2 561 aa26.46■■□□□ 1.83
HDAC3-201ENST00000305264 OR4C6Q8NH72 309 aa26.46■■□□□ 1.83
HDAC3-201ENST00000305264 FOPNLQ96NB1 174 aa26.46■■□□□ 1.83
HDAC3-201ENST00000305264 NMRAL1Q9HBL8 299 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms