RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 FMR1NBQ8N0W7 255 aaPredicted RBP5.73□□□□□ -1.49
ZNF440-201ENST00000304060 UMODL1-AS1Q8N2C9 162 aa5.73□□□□□ -1.49
ZNF440-201ENST00000304060 AOPEPQ8N6M6 819 aa5.73□□□□□ -1.49
ZNF440-201ENST00000304060 CSPG4P5Q96PW8 444 aa5.73□□□□□ -1.49
ZNF440-201ENST00000304060 TEX101Q9BY14 249 aa5.73□□□□□ -1.49
ZNF440-201ENST00000304060 FRMD8Q9BZ67 464 aaPredicted RBP5.73□□□□□ -1.49
ZNF440-201ENST00000304060 GALNT8Q9NY28 637 aa5.73□□□□□ -1.49
ZNF440-201ENST00000304060 A0A088AWK7 358 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 GOLGA6L10A0A0M3HER8 536 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 QSOX1O00391 747 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 ZMPSTE24O75844 475 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 ATP1A3P13637 1013 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 MSH3P20585 1137 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 LPOP22079 712 aaPredicted RBP5.72□□□□□ -1.49
ZNF440-201ENST00000304060 PRCPP42785 496 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 PTGIRP43119 386 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 RPL34P49207 117 aaKnown RBP5.72□□□□□ -1.49
ZNF440-201ENST00000304060 CLCNKAP51800 687 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 SKP1P63208 163 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 DPTQ07507 201 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 ITGA9Q13797 1035 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 C21orf62-AS1Q17RA5 79 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 FAM214AQ32MH5 1076 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 BOLA3Q53S33 107 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 DHRS4L2Q6PKH6 230 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 ZNF554Q86TJ5 538 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 NUDCD1Q96RS6 583 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 CPXM1Q96SM3 734 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 C11orf70Q9BRQ4 267 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 LUZP4Q9P127 313 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 C19orf25Q9UFG5 118 aaPredicted RBP5.72□□□□□ -1.49
ZNF440-201ENST00000304060 ANAPC5Q9UJX4 755 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 ACSL5Q9ULC5 683 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 PKP3Q9Y446 797 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 LRRK2Q5S007 2527 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 MN1Q10571 1320 aaPredicted RBP5.72□□□□□ -1.49
ZNF440-201ENST00000304060 A0A1B0GVG6 124 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 LDLRP01130 860 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 TROVE2P10155 538 aaKnown RBP eCLIP5.72□□□□□ -1.49
ZNF440-201ENST00000304060 UQCRFS1P47985 274 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 RAB28P51157 221 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 DGKQP52824 942 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 CSE1LP55060 971 aaKnown RBP5.72□□□□□ -1.49
ZNF440-201ENST00000304060 PNOCQ13519 176 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 ZNF169Q14929 603 aaPredicted RBP5.72□□□□□ -1.49
ZNF440-201ENST00000304060 SPRED3Q2MJR0 410 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 NADK2Q4G0N4 442 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 OLFML1Q6UWY5 402 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 FJX1Q86VR8 437 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 AMZ2Q86W34 360 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 PPP4R1Q8TF05 950 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 METTL21AQ8WXB1 218 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 NDNQ99608 321 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 TUBGCP2Q9BSJ2 902 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 CCDC68Q9H2F9 335 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 HRASLS2Q9NWW9 162 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.72□□□□□ -1.49
ZNF440-201ENST00000304060 KIAA1468Q9P260 1216 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 DNAJC16Q9Y2G8 782 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 A8MX80 341 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 KLRC4O43908 158 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 NELFEP18615 380 aaKnown RBP5.72□□□□□ -1.49
ZNF440-201ENST00000304060 XRCC1P18887 633 aaPredicted RBP5.72□□□□□ -1.49
ZNF440-201ENST00000304060 UGT1A1P22309 533 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 GKP32189 559 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 CAPZBP47756 277 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 SRSF6Q13247 344 aaKnown RBP5.72□□□□□ -1.49
ZNF440-201ENST00000304060 SF3B4Q15427 424 aaKnown RBP eCLIP5.72□□□□□ -1.49
ZNF440-201ENST00000304060 YOD1Q5VVQ6 348 aaPredicted RBP5.72□□□□□ -1.49
ZNF440-201ENST00000304060 CRTC3Q6UUV7 619 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 TMEM200AQ86VY9 491 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 CNGA4Q8IV77 575 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 MCOLN3Q8TDD5 553 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 LCN9Q8WX39 176 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 GFM2Q969S9 779 aaKnown RBP5.72□□□□□ -1.49
ZNF440-201ENST00000304060 LURAP1Q96LR2 239 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 SARGQ9BW04 601 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 SRMSQ9H3Y6 488 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 RABGEF1Q9UJ41 708 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 SPO11Q9Y5K1 396 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 ADGRG1Q9Y653 693 aa5.72□□□□□ -1.49
ZNF440-201ENST00000304060 TLN1Q9Y490 2541 aaKnown RBP5.71□□□□□ -1.49
ZNF440-201ENST00000304060 LRRD1A4D1F6 860 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 HTR3EA5X5Y0 456 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 TCP11X1B4DZS4 312 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 INSIG1O15503 277 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 FYNP06241 537 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 CCDC175P0C221 793 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 TUBA4AP68366 448 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 HSPA14Q0VDF9 509 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 PPP2R5EQ16537 467 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 PARP6Q2NL67 630 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 LDLRAP1Q5SW96 308 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 C1QL3Q5VWW1 255 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 ARMC3Q5W041 872 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 ISLR2Q6UXK2 745 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 BNC2Q6ZN30 1099 aaPredicted RBP5.71□□□□□ -1.49
ZNF440-201ENST00000304060 Q6ZVL8 140 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 BHLHA9Q7RTU4 235 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 PPP1R2P1Q96PQ5 205 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms