RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 CKMT2P17540 419 aa14.27□□□□□ -0.12
SMG8-201ENST00000300917 MSH3P20585 1137 aa14.27□□□□□ -0.12
SMG8-201ENST00000300917 ADGRE1Q14246 886 aa14.27□□□□□ -0.12
SMG8-201ENST00000300917 PCBP2Q15366 365 aaKnown RBP eCLIP14.27□□□□□ -0.12
SMG8-201ENST00000300917 FNDC3BQ53EP0 1204 aaKnown RBP14.27□□□□□ -0.12
SMG8-201ENST00000300917 C6orf52Q5T4I8 152 aa14.27□□□□□ -0.12
SMG8-201ENST00000300917 FBXL19Q6PCT2 694 aa14.27□□□□□ -0.12
SMG8-201ENST00000300917 CYP20A1Q6UW02 462 aa14.27□□□□□ -0.12
SMG8-201ENST00000300917 ISG20Q96AZ6 181 aaKnown RBP14.27□□□□□ -0.12
SMG8-201ENST00000300917 PDLIM5Q96HC4 596 aaKnown RBP14.27□□□□□ -0.12
SMG8-201ENST00000300917 CNBD2Q96M20 576 aa14.27□□□□□ -0.12
SMG8-201ENST00000300917 ZNF641Q96N77 438 aaPredicted RBP14.27□□□□□ -0.12
SMG8-201ENST00000300917 CIB1Q99828 191 aa14.27□□□□□ -0.12
SMG8-201ENST00000300917 IL36AQ9UHA7 158 aa14.27□□□□□ -0.12
SMG8-201ENST00000300917 K7EPI3 171 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 PEX1O43933 1283 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 ULK1O75385 1050 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 LRATO95237 230 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 STAMBPO95630 424 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 ANXA5P08758 320 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 ELFN1P0C7U0 828 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 PBX2P40425 430 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 EPHA5P54756 1037 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 ST8SIA6P61647 398 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 FOLH1Q04609 750 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 ILF2Q12905 390 aaKnown RBP14.27□□□□□ -0.13
SMG8-201ENST00000300917 SF1Q15637 639 aaKnown RBP14.27□□□□□ -0.13
SMG8-201ENST00000300917 PTCHD3Q3KNS1 767 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 CCSMST1Q4G0I0 132 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 RARS2Q5T160 578 aaKnown RBP14.27□□□□□ -0.13
SMG8-201ENST00000300917 RNF220Q5VTB9 566 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 IRGCQ6NXR0 463 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 CBARPQ8N350 705 aaPredicted RBP14.27□□□□□ -0.13
SMG8-201ENST00000300917 PDPRQ8NCN5 879 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 PHC3Q8NDX5 983 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 C1QTNF3Q9BXJ4 246 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 NUSAP1Q9BXS6 441 aaKnown RBP14.27□□□□□ -0.13
SMG8-201ENST00000300917 CPEB1Q9BZB8 566 aaKnown RBP14.27□□□□□ -0.13
SMG8-201ENST00000300917 RIMS3Q9UJD0 308 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 PRKAB1Q9Y478 270 aa14.27□□□□□ -0.13
SMG8-201ENST00000300917 RFXAPO00287 272 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 TSPAN6O43657 245 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 HIST1H2AGP0C0S8 130 aaPredicted RBP14.26□□□□□ -0.13
SMG8-201ENST00000300917 HIST1H2ADP20671 130 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 GPM6BQ13491 265 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 MED21Q13503 144 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 PSRC1Q6PGN9 363 aaPredicted RBP14.26□□□□□ -0.13
SMG8-201ENST00000300917 MED8Q96G25 268 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 HIST1H2AHQ96KK5 128 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 ANKRD27Q96NW4 1050 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 LYSMD1Q96S90 227 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 HIST1H2AJQ99878 128 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 H2AFJQ9BTM1 129 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 CD300AQ9UGN4 299 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 SCOCQ9UIL1 159 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 SAC3D1A6NKF1 404 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 K7ESM1 405 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 LSM1O15116 133 aaKnown RBP14.26□□□□□ -0.13
SMG8-201ENST00000300917 SMNDC1O75940 238 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMG8-201ENST00000300917 GSTA3Q16772 222 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 CAPRIN2Q6IMN6 1127 aaKnown RBP14.26□□□□□ -0.13
SMG8-201ENST00000300917 PARS2Q7L3T8 475 aaKnown RBP14.26□□□□□ -0.13
SMG8-201ENST00000300917 SPATA19Q7Z5L4 167 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 RGL4Q8IZJ4 473 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 SLCO4A1Q96BD0 722 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 YIPF3Q9GZM5 350 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 SUCOQ9UBS9 1254 aaKnown RBP14.26□□□□□ -0.13
SMG8-201ENST00000300917 BCAP29Q9UHQ4 241 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 SLC8A2Q9UPR5 921 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 F5P12259 2224 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 A0A1W2PP18 115 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 LYNP07948 512 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 CD9P21926 228 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 VIPR1P32241 457 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 HALP42357 657 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 ATP4BP51164 291 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 SELPLGQ14242 412 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 LYPLAL1Q5VWZ2 237 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 SULT1C3Q6IMI6 304 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 GPR65Q8IYL9 337 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 KIAA2013Q8IYS2 634 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 AP2M1Q96CW1 435 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 SEPHS2Q99611 448 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 GID8Q9NWU2 228 aa14.26□□□□□ -0.13
SMG8-201ENST00000300917 NUP214P35658 2090 aaPredicted RBP14.25□□□□□ -0.13
SMG8-201ENST00000300917 CARNS1A5YM72 827 aa14.25□□□□□ -0.13
SMG8-201ENST00000300917 PAX7P23759 505 aa14.25□□□□□ -0.13
SMG8-201ENST00000300917 OXTRP30559 389 aa14.25□□□□□ -0.13
SMG8-201ENST00000300917 ZFP36L2P47974 494 aaKnown RBP14.25□□□□□ -0.13
SMG8-201ENST00000300917 FAM78AQ5JUQ0 283 aa14.25□□□□□ -0.13
SMG8-201ENST00000300917 ADGRG6Q86SQ4 1221 aa14.25□□□□□ -0.13
SMG8-201ENST00000300917 ANKRD46Q86W74 232 aa14.25□□□□□ -0.13
SMG8-201ENST00000300917 LIX1Q8N485 282 aa14.25□□□□□ -0.13
SMG8-201ENST00000300917 STON2Q8WXE9 905 aa14.25□□□□□ -0.13
SMG8-201ENST00000300917 PPP2R3CQ969Q6 453 aa14.25□□□□□ -0.13
SMG8-201ENST00000300917 TSSK3Q96PN8 268 aa14.25□□□□□ -0.13
SMG8-201ENST00000300917 ACTL8Q9H568 366 aa14.25□□□□□ -0.13
SMG8-201ENST00000300917 DENND4CQ5VZ89 1909 aa14.25□□□□□ -0.13
SMG8-201ENST00000300917 VPS4BO75351 444 aa14.25□□□□□ -0.13
SMG8-201ENST00000300917 PRR35P0CG20 571 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms