RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 ERLEC1Q96DZ1 483 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 SLC47A1Q96FL8 570 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 P2RY12Q9H244 342 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 PFDN4Q9NQP4 134 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 IL17CQ9P0M4 197 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 ARIH1Q9Y4X5 557 aaPredicted RBP23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 OR6C75A6NL08 312 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 ESR1P03372 595 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 S100BP04271 92 aaPredicted RBP23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 C7P10643 843 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 MBL2P11226 248 aaPredicted RBP23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 CCNA2P20248 432 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 PAX3P23760 479 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 C21orf59P57076 290 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 CYP4F3Q08477 520 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 KIAA0040Q15053 153 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 GALNT18Q6P9A2 607 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 C16orf87Q6PH81 154 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 TRAF7Q6Q0C0 670 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 THAP5Q7Z6K1 395 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 DOK1Q99704 481 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 ACTR8Q9H981 624 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 FAM118AQ9NWS6 357 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 WWOXQ9NZC7 414 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 GMEB1Q9Y692 573 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 MANSC4A6NHS7 340 aaPredicted RBP23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 UPK3BL1B0FP48 263 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 UPK3BL2E5RIL1 263 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 NOL3O60936 208 aaKnown RBP23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 CLDN11O75508 207 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 RHOAP61586 193 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 KCNAB2Q13303 367 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 CPSF6Q16630 551 aaKnown RBP eCLIP23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 Q6ZNX1 250 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 PIWIL3Q7Z3Z3 882 aaKnown RBP23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 GALNT10Q86SR1 603 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 SLC15A4Q8N697 577 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 MBOAT4Q96T53 435 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 DPY30Q9C005 99 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 ARMC7Q9H6L4 198 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 ASB8Q9H765 288 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 CCL27Q9Y4X3 112 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 LOC730098B7Z3J9 87 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 PFDN6O15212 129 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 HTR1AP08908 422 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 MYCLP1P12525 358 aaPredicted RBP23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 CRHBPP24387 322 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 FXNQ16595 210 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 GALNT5Q7Z7M9 940 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 C8orf59Q8N0T1 100 aaPredicted RBP23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 WFDC5Q8TCV5 224 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 PLEKHA8Q96JA3 519 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 CLPBQ9H078 707 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 ZNF490Q9ULM2 529 aaPredicted RBP23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 VPS9D1Q9Y2B5 631 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 ST14Q9Y5Y6 855 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 GBF1Q92538 1859 aa23.93■■□□□ 1.42
SPTSSA-201ENST00000298130 INPPL1O15357 1258 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 LRATO95237 230 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 NEK2P51955 445 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 BROXQ5VW32 411 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 ZNF548Q8NEK5 533 aaPredicted RBP23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 ZNF420Q8TAQ5 688 aaPredicted RBP23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 HPS4Q9NQG7 708 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 LATS2Q9NRM7 1088 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 ZNF840PA6NDX5 716 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 H0YAE9 185 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 ZNF701M0R085 212 aaPredicted RBP23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 MITFO75030 526 aaPredicted RBP23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 E2F6O75461 281 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 OTCP00480 354 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 PFKLP17858 780 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 OR1D2P34982 312 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 PLA2G16P53816 162 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 SPATS1Q496A3 300 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 NCEH1Q6PIU2 408 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 RGL4Q8IZJ4 473 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 ADGRG2Q8IZP9 1017 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 SPARTQ8N0X7 666 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 SDCCAG3Q96C92 435 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 TBC1D23Q9NUY8 699 aa23.92■■□□□ 1.42
SPTSSA-201ENST00000298130 ILVBLA1L0T0 632 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 XPNPEP2O43895 674 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 BNIP3LO60238 219 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 PGRP06401 933 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 CYP4B1P13584 511 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 CLCN4P51793 760 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 CD47Q08722 323 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 PCBP2Q15366 365 aaKnown RBP eCLIP23.91■■□□□ 1.422e-7■□□□□ 10.3
SPTSSA-201ENST00000298130 ZNF554Q86TJ5 538 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 BARD1Q99728 777 aaKnown RBP23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 FBXO10Q9UK96 956 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 CXCR6O00574 342 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 AREL1O15033 823 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 SMAD6O43541 496 aaKnown RBP23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 CLDN7O95471 211 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 PHC1P78364 1004 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 ARHGEF7Q14155 803 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 SPIDRQ14159 915 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 CROCCP3Q8IVE0 287 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms