RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 PAN2Q504Q3 1202 aaKnown RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 CES5AQ6NT32 575 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 FKBP9P1Q75LS8 142 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 FAM120BQ96EK7 910 aaKnown RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 SENP8Q96LD8 212 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 BTBD2Q9BX70 525 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 BRINP2Q9C0B6 783 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 ROGDIQ9GZN7 287 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 AGO3Q9H9G7 860 aaKnown RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 ZNF225Q9UK10 706 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 EIF3LQ9Y262 564 aaKnown RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 PKP3Q9Y446 797 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 SPO11Q9Y5K1 396 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 LCTP09848 1927 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 hCG_2039718K7EN88 272 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 NDUFS3O75489 264 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 MYCLP1P12525 358 aaPredicted RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 GADD45AP24522 165 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 CXCR2P25025 360 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 AKT1P31749 480 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 SLC35A2P78381 396 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 SNAP47Q5SQN1 464 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 SYT6Q5T7P8 510 aaPredicted RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 GDPD3Q7L5L3 318 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 HIPK1Q86Z02 1210 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 P3H2Q8IVL5 708 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 AMER2Q8N7J2 671 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 TTC29Q8NA56 475 aaPredicted RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 ISG20Q96AZ6 181 aaKnown RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 APOL4Q9BPW4 351 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 TTYH2Q9BSA4 534 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 SYTL2Q9HCH5 934 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 TAS2R13Q9NYV9 303 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 TMEFF2Q9UIK5 374 aaPredicted RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 MYLKQ15746 1914 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 CENPXA8MT69 81 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 TNFRSF10AO00220 468 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 TFECO14948 347 aaPredicted RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 ZW10O43264 779 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 PAPSS2O95340 614 aaPredicted RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 DPEP1P16444 411 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 RYKP34925 604 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 FAM214AQ32MH5 1076 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 C18orf21Q32NC0 220 aaPredicted RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 RFX4Q33E94 735 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 ATAD3CQ5T2N8 411 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 Q6ZSR9 355 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 GALNT10Q86SR1 603 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 CYP4Z1Q86W10 505 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 LACC1Q8IV20 430 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 ZDHHC21Q8IVQ6 265 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 PARP16Q8N5Y8 322 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 SCAMP5Q8TAC9 235 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 SLC13A3Q8WWT9 602 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 KIAA1191Q96A73 305 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 KLRG1Q96E93 195 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 PPP1R2P1Q96PQ5 205 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 YME1L1Q96TA2 773 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 CHCHD6Q9BRQ6 235 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 TMEM246Q9BRR3 403 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 NUSAP1Q9BXS6 441 aaKnown RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 MMP27Q9H306 513 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 VNN3Q9NY84 501 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 WBP11Q9Y2W2 641 aaKnown RBP10.09□□□□□ -0.79
LMX1A-201ENST00000294816 GPSM3Q9Y4H4 160 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 MIA3Q5JRA6 1907 aa10.09□□□□□ -0.79
LMX1A-201ENST00000294816 CREG1O75629 220 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 MLYCDO95822 493 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 EPHA2P29317 976 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 LIPAP38571 399 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 RENBPP51606 427 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 ARHGAP1Q07960 439 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 PLEKHG6Q3KR16 790 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 RFTN2Q52LD8 501 aaPredicted RBP10.08□□□□□ -0.8
LMX1A-201ENST00000294816 FAM209AQ5JX71 171 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 GPSM1Q86YR5 675 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 CCDC117Q8IWD4 279 aaPredicted RBP10.08□□□□□ -0.8
LMX1A-201ENST00000294816 GALNT12Q8IXK2 581 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 ZNF548Q8NEK5 533 aaPredicted RBP10.08□□□□□ -0.8
LMX1A-201ENST00000294816 OR4L1Q8NH43 312 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 NETO1Q8TDF5 533 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 REXO5Q96IC2 774 aaKnown RBP10.08□□□□□ -0.8
LMX1A-201ENST00000294816 BCL7BQ9BQE9 202 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 AARSD1Q9BTE6 412 aaKnown RBP10.08□□□□□ -0.8
LMX1A-201ENST00000294816 OR2B2Q9GZK3 357 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 QTRT2Q9H974 415 aaKnown RBP10.08□□□□□ -0.8
LMX1A-201ENST00000294816 PRM3Q9NNZ6 103 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 EHD3Q9NZN3 535 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 OSGIN1Q9UJX0 560 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 PCTPQ9UKL6 214 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 NAALAD2Q9Y3Q0 740 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 MCM3APO60318 1980 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 FAM172BPA6NC97 362 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 EIF3FO00303 357 aaPredicted RBP10.08□□□□□ -0.8
LMX1A-201ENST00000294816 AP3D1O14617 1153 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 PTTG1O95997 202 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 PRR35P0CG20 571 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 ZNF135P52742 658 aaPredicted RBP10.08□□□□□ -0.8
LMX1A-201ENST00000294816 ERVPABLB-1P60509 514 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms