RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 SLC26A9Q7LBE3 791 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZC3H3Q8IXZ2 948 aaKnown RBP11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 C3orf58Q8NDZ4 430 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 SDCBP2Q9H190 292 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZNHIT2Q9UHR6 403 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 TLX1P31314 330 aaPredicted RBP11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 ATP5C1P36542 298 aaKnown RBP11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 IDH3AP50213 366 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 CLDN10P78369 228 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 CBX2Q14781 532 aaPredicted RBP11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 ACOX1Q15067 660 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 AP5B1Q2VPB7 878 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 AKIRIN2Q53H80 203 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 RALGPS1Q5JS13 557 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 VWA5B1Q5TIE3 1220 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 THOC7Q6I9Y2 204 aaKnown RBP11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 FRMD7Q6ZUT3 714 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 RBFAQ8N0V3 343 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 BCL7CQ8WUZ0 217 aaPredicted RBP11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 TWIST2Q8WVJ9 160 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 MED28Q9H204 178 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 MCUBQ9NWR8 336 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 SMPD4Q9NXE4 827 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 BAIAP2Q9UQB8 552 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 COQ4Q9Y3A0 265 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 TRAV19A0A0A6YYK7 116 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 FAM149AA5PLN7 773 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 EPOPA6NHQ4 379 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 ARHGEF15O94989 841 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 HAPLN1P10915 354 aaPredicted RBP11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 GABRR2P28476 465 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 CLCN4P51793 760 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 LEXMQ3ZCV2 418 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 VPS26BQ4G0F5 336 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 SETMARQ53H47 684 aaPredicted RBP11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 XKR6Q5GH73 641 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 HLA-DQA1Q5Y7H0 255 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 FAM35AQ86V20 835 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 PACRGLQ8N7B6 248 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 OR8H1Q8NGG4 311 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 RNASE11Q8TAA1 199 aaKnown RBP11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZNF516Q92618 1163 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 C11orf24Q96F05 449 aaPredicted RBP11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 CHCHD6Q9BRQ6 235 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 C12orf65Q9H3J6 166 aaKnown RBP11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 COQ10BQ9H8M1 238 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 CREB1P16220 341 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 SLC7A1P30825 629 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 WDR4P57081 412 aaKnown RBP11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 HECTD2Q5U5R9 776 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 LCLAT1Q6UWP7 414 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 RASSF6Q6ZTQ3 369 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 AHSA2Q719I0 299 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 ADGRD2Q7Z7M1 963 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 METTL3Q86U44 580 aaKnown RBP11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 TRAPPC5Q8IUR0 188 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 SLC30A4O14863 429 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 NPHS1O60500 1241 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 CCNFP41002 786 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 HNF4AP41235 474 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 PTPN5P54829 565 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 RAP1GAP2Q684P5 730 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 DSG4Q86SJ6 1040 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 C12orf76Q8N812 135 aaPredicted RBP11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 VMP1Q96GC9 406 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 PHF7Q9BWX1 381 aaPredicted RBP11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 GSDMCQ9BYG8 508 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZDHHC18Q9NUE0 388 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 PMF1-BGLAPU3KQ54 211 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 AQP12BA6NM10 295 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 ORC5O43913 435 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 AP2A1O95782 977 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 ATF6P18850 670 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 ADRA1BP35368 520 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 ABL2P42684 1182 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 LCP2Q13094 533 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 IL18Q14116 193 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 HERC3Q15034 1050 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 PIK3R6Q5UE93 754 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZDHHC24Q6UX98 284 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 GPR149Q86SP6 731 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 AQP12AQ8IXF9 295 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 HSD3B7Q9H2F3 369 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 LRTM1Q9HBL6 345 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 TCHHQ07283 1943 aa11.66□□□□□ -0.54
SYNGAP1-201ENST00000293748 NOS1APO75052 506 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 HIST1H2ABP04908 130 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 SNRPD1P62314 119 aaKnown RBP11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 SEMA5AQ13591 1074 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZBED5Q49AG3 693 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 HIST3H2AQ7L7L0 130 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 GALNT5Q7Z7M9 940 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 UNC5BQ8IZJ1 945 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZNF781Q8N8C0 355 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 CSGALNACT1Q8TDX6 532 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 HIST1H2ACQ93077 130 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 MFSD1Q9H3U5 465 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 SLC9A3R1O14745 358 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 CILPO75339 1184 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 GCATO75600 419 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms